Analysis of interatomic Contacts of Structural Units in PDB entry:
6O84


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6O84 entry

There are 2 chains in PDB entry 6O84 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 109GLU 683
B
 LYS 109GLU 683
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 6O84. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
109 137Right-handed alpha
Helix 2
AA2
A
142 166Right-handed alpha
Helix 3
AA3
A
182 209Right-handed alpha
Helix 4
AA4
A
216 239Right-handed alpha
Helix 5
AA5
A
247 271Right-handed alpha
Helix 6
AA6
A
304 310Right-handed alpha
Helix 7
AA7
A
317 336Right-handed alpha
Helix 8
AA8
A
361 380Right-handed alpha
Helix 9
AA9
A
391 421Right-handed alpha
Helix 10
AB1
A
508 516Right-handed alpha
Helix 11
AB2
A
517 533Right-handed alpha
Helix 12
AB3
A
540 571Right-handed alpha
Helix 13
AB4
A
572 574Right-handed 310
Helix 14
AB5
A
607 631Right-handed alpha
Helix 15
AB6
A
642 647Right-handed alpha
Helix 16
AB7
A
648 683Right-handed alpha
Helix 17
AB8
B
110 137Right-handed alpha
Helix 18
AB9
B
142 166Right-handed alpha
Helix 19
AC1
B
182 209Right-handed alpha
Helix 20
AC2
B
216 239Right-handed alpha
Helix 21
AC3
B
247 271Right-handed alpha
Helix 22
AC4
B
304 310Right-handed alpha
Helix 23
AC5
B
317 336Right-handed alpha
Helix 24
AC6
B
361 380Right-handed alpha
Helix 25
AC7
B
391 421Right-handed alpha
Helix 26
AC8
B
508 516Right-handed alpha
Helix 27
AC9
B
517 533Right-handed alpha
Helix 28
AD1
B
540 571Right-handed alpha
Helix 29
AD2
B
572 574Right-handed 310
Helix 30
AD3
B
607 631Right-handed alpha
Helix 31
AD4
B
642 647Right-handed alpha
Helix 32
AD5
B
648 683Right-handed alpha
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There are 2 sheets in PDB entry 6O84. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 175first strand
Strand 2
A
242 244anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
173 175first strand
Strand 2
B
242 244anti-parallel
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