Analysis of interatomic Contacts of Structural Units in PDB entry:
6O8C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6O8C entry

There are 2 chains in PDB entry 6O8C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -4THR 651
B
 LEU -3LYS 615
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 6O8C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
48 60Right-handed alpha
Helix 2
AA2
A
93 99Right-handed alpha
Helix 3
AA3
A
100 104Right-handed 310
Helix 4
AA4
A
108 129Right-handed alpha
Helix 5
AA5
A
137 139Right-handed 310
Helix 6
AA6
A
181 190Right-handed alpha
Helix 7
AA7
A
201 217Right-handed alpha
Helix 8
AA8
A
225 230Right-handed alpha
Helix 9
AA9
A
230 240Right-handed alpha
Helix 10
AB1
A
270 283Right-handed alpha
Helix 11
AB2
A
294 307Right-handed alpha
Helix 12
AB3
A
331 344Right-handed alpha
Helix 13
AB4
A
346 350Right-handed 310
Helix 14
AB5
A
366 370Right-handed 310
Helix 15
AB6
A
407 476Right-handed alpha
Helix 16
AB7
A
498 527Right-handed alpha
Helix 17
AB8
A
534 540Right-handed alpha
Helix 18
AB9
A
543 546Right-handed 310
Helix 19
AC1
A
547 573Right-handed alpha
Helix 20
AC2
A
576 648Right-handed alpha
Helix 21
AC3
B
48 61Right-handed alpha
Helix 22
AC4
B
93 99Right-handed alpha
Helix 23
AC5
B
108 129Right-handed alpha
Helix 24
AC6
B
137 139Right-handed 310
Helix 25
AC7
B
181 187Right-handed alpha
Helix 26
AC8
B
203 217Right-handed alpha
Helix 27
AC9
B
230 239Right-handed alpha
Helix 28
AD1
B
270 285Right-handed alpha
Helix 29
AD2
B
294 307Right-handed alpha
Helix 30
AD3
B
331 344Right-handed alpha
Helix 31
AD4
B
346 350Right-handed 310
Helix 32
AD5
B
366 370Right-handed 310
Helix 33
AD6
B
407 483Right-handed alpha
Helix 34
AD7
B
497 512Right-handed alpha
Helix 35
AD8
B
512 527Right-handed alpha
Helix 36
AD9
B
543 546Right-handed 310
Helix 37
AE1
B
547 573Right-handed alpha
Helix 38
AE2
B
576 604Right-handed alpha
Helix 39
AE3
B
604 649Right-handed alpha
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There are 8 sheets in PDB entry 6O8C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1 3first strand
Strand 2
A
7 17anti-parallel
Strand 3
A
22 28anti-parallel
Strand 4
A
34 39anti-parallel
Strand 5
A
82 87anti-parallel
Strand 6
A
70 75anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 145first strand
Strand 2
A
151 155anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
221 222first strand
Strand 2
A
247 250parallel
Strand 3
A
257 260anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
320 326first strand
Strand 2
A
309 315anti-parallel
Strand 3
A
379 382parallel
Strand 4
A
351 354anti-parallel
Strand 5
A
357 359anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1 3first strand
Strand 2
B
7 17anti-parallel
Strand 3
B
21 28anti-parallel
Strand 4
B
34 40anti-parallel
Strand 5
B
82 87anti-parallel
Strand 6
B
70 75anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 145first strand
Strand 2
B
151 155anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
221 222first strand
Strand 2
B
247 249parallel
Strand 3
B
258 260anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
320 326first strand
Strand 2
B
309 315anti-parallel
Strand 3
B
379 382parallel
Strand 4
B
351 354anti-parallel
Strand 5
B
357 359anti-parallel
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