Analysis of interatomic Contacts of Structural Units in PDB entry:
6O8G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6O8G entry

There are 9 chains in PDB entry 6O8G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 2GLY 582
B
 GLY 3GLU 591
C
 GLY 3PRO 585
D
 T 1 C 15
E
 G 1 A 16
F
 T 1 C 15
G
 G 2 A 16
H
 T 1 C 15
I
 G 1 A 16
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 68 helices in PDB entry 6O8G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 30Right-handed alpha
Helix 2
AA2
A
44 57Right-handed alpha
Helix 3
AA3
A
66 81Right-handed alpha
Helix 4
AA4
A
115 133Right-handed alpha
Helix 5
AA5
A
142 146Right-handed 310
Helix 6
AA6
A
150 157Right-handed alpha
Helix 7
AA7
A
168 179Right-handed alpha
Helix 8
AA8
A
252 276Right-handed alpha
Helix 9
AA9
A
279 298Right-handed alpha
Helix 10
AB1
A
305 308Right-handed 310
Helix 11
AB2
A
309 315Right-handed alpha
Helix 12
AB3
A
324 329Right-handed alpha
Helix 13
AB4
A
339 349Right-handed alpha
Helix 14
AB5
A
349 364Right-handed alpha
Helix 15
AB6
A
368 374Right-handed 310
Helix 16
AB7
A
378 386Right-handed alpha
Helix 17
AB8
A
397 404Right-handed alpha
Helix 18
AB9
A
429 444Right-handed alpha
Helix 19
AC1
A
454 468Right-handed alpha
Helix 20
AC2
A
480 493Right-handed alpha
Helix 21
AC3
A
530 539Right-handed alpha
Helix 22
AC4
A
540 542Right-handed 310
Helix 23
AC5
A
557 581Right-handed alpha
Helix 24
AC6
B
16 30Right-handed alpha
Helix 25
AC7
B
44 57Right-handed alpha
Helix 26
AC8
B
66 81Right-handed alpha
Helix 27
AC9
B
116 133Right-handed alpha
Helix 28
AD1
B
142 146Right-handed 310
Helix 29
AD2
B
150 157Right-handed alpha
Helix 30
AD3
B
168 179Right-handed alpha
Helix 31
AD4
B
252 276Right-handed alpha
Helix 32
AD5
B
279 300Right-handed alpha
Helix 33
AD6
B
305 308Right-handed 310
Helix 34
AD7
B
309 314Right-handed alpha
Helix 35
AD8
B
324 329Right-handed 310
Helix 36
AD9
B
339 349Right-handed alpha
Helix 37
AE1
B
349 364Right-handed alpha
Helix 38
AE2
B
370 374Right-handed 310
Helix 39
AE3
B
378 385Right-handed alpha
Helix 40
AE4
B
397 404Right-handed alpha
Helix 41
AE5
B
429 443Right-handed alpha
Helix 42
AE6
B
454 468Right-handed alpha
Helix 43
AE7
B
480 494Right-handed alpha
Helix 44
AE8
B
526 529Right-handed 310
Helix 45
AE9
B
530 539Right-handed alpha
Helix 46
AF1
B
557 582Right-handed alpha
Helix 47
AF2
C
16 31Right-handed alpha
Helix 48
AF3
C
44 57Right-handed alpha
Helix 49
AF4
C
66 81Right-handed alpha
Helix 50
AF5
C
115 133Right-handed alpha
Helix 51
AF6
C
142 146Right-handed 310
Helix 52
AF7
C
150 157Right-handed alpha
Helix 53
AF8
C
168 179Right-handed alpha
Helix 54
AF9
C
252 278Right-handed alpha
Helix 55
AG1
C
279 297Right-handed alpha
Helix 56
AG2
C
305 308Right-handed 310
Helix 57
AG3
C
309 315Right-handed alpha
Helix 58
AG4
C
324 329Right-handed 310
Helix 59
AG5
C
339 364Right-handed alpha
Helix 60
AG6
C
368 372Right-handed 310
Helix 61
AG7
C
378 385Right-handed alpha
Helix 62
AG8
C
397 404Right-handed alpha
Helix 63
AG9
C
429 444Right-handed alpha
Helix 64
AH1
C
454 468Right-handed alpha
Helix 65
AH2
C
480 494Right-handed alpha
Helix 66
AH3
C
530 539Right-handed alpha
Helix 67
AH4
C
540 544Right-handed 310
Helix 68
AH5
C
557 582Right-handed alpha
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There are 12 sheets in PDB entry 6O8G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 89first strand
Strand 2
A
136 140parallel
Strand 3
A
60 63parallel
Strand 4
A
334 338parallel
Strand 5
A
388 393parallel
Strand 6
A
34 39parallel
Strand 7
A
408 410parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 162first strand
Strand 2
A
240 243anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 183first strand
Strand 2
A
192 196parallel
Strand 3
A
199 202anti-parallel
Strand 4
A
210 216anti-parallel
Strand 5
A
221 228anti-parallel
Strand 6
A
234 237anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
421 425first strand
Strand 2
A
548 552parallel
Strand 3
A
514 519parallel
Strand 4
A
447 451parallel
Strand 5
A
498 501parallel
Strand 6
A
472 475parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
85 89first strand
Strand 2
B
136 140parallel
Strand 3
B
60 63parallel
Strand 4
B
334 338parallel
Strand 5
B
388 393parallel
Strand 6
B
34 39parallel
Strand 7
B
408 410parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
159 162first strand
Strand 2
B
240 243anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
182 183first strand
Strand 2
B
192 196parallel
Strand 3
B
199 203anti-parallel
Strand 4
B
210 217anti-parallel
Strand 5
B
220 228anti-parallel
Strand 6
B
234 238anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
421 425first strand
Strand 2
B
548 552parallel
Strand 3
B
514 520parallel
Strand 4
B
447 451parallel
Strand 5
B
498 501parallel
Strand 6
B
472 474parallel
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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
85 89first strand
Strand 2
C
136 140parallel
Strand 3
C
60 63parallel
Strand 4
C
334 338parallel
Strand 5
C
388 393parallel
Strand 6
C
34 39parallel
Strand 7
C
408 410parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
159 162first strand
Strand 2
C
240 243anti-parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
182 183first strand
Strand 2
C
192 196parallel
Strand 3
C
199 203anti-parallel
Strand 4
C
211 216anti-parallel
Strand 5
C
221 228anti-parallel
Strand 6
C
233 238anti-parallel
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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
421 425first strand
Strand 2
C
548 552parallel
Strand 3
C
514 519parallel
Strand 4
C
447 451parallel
Strand 5
C
498 501parallel
Strand 6
C
472 474parallel
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