Analysis of interatomic Contacts of Structural Units in PDB entry:
6O93


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6O93 entry

There is 1 chain in PDB entry 6O93 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 27PHE 424
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 25 helices in PDB entry 6O93. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
35 44Right-handed alpha
Helix 2
AA2
A
47 53Right-handed alpha
Helix 3
AA3
A
54 63Right-handed alpha
Helix 4
AA4
A
72 77Right-handed 310
Helix 5
AA5
A
82 90Right-handed alpha
Helix 6
AA6
A
105 117Right-handed alpha
Helix 7
AA7
A
118 120Right-handed 310
Helix 8
AA8
A
130 134Right-handed 310
Helix 9
AA9
A
140 148Right-handed alpha
Helix 10
AB1
A
149 159Right-handed alpha
Helix 11
AB2
A
164 175Right-handed alpha
Helix 12
AB3
A
177 182Right-handed alpha
Helix 13
AB4
A
183 195Right-handed alpha
Helix 14
AB5
A
200 222Right-handed alpha
Helix 15
AB6
A
229 238Right-handed alpha
Helix 16
AB7
A
245 260Right-handed alpha
Helix 17
AB8
A
269 277Right-handed alpha
Helix 18
AB9
A
280 285Right-handed alpha
Helix 19
AC1
A
297 312Right-handed alpha
Helix 20
AC2
A
324 332Right-handed alpha
Helix 21
AC3
A
334 351Right-handed alpha
Helix 22
AC4
A
377 394Right-handed alpha
Helix 23
AC5
A
405 409Right-handed 310
Helix 24
AC6
A
410 415Right-handed alpha
Helix 25
AC7
A
417 421Right-handed 310
Back to top of page

There is 1 sheet (AA1) in PDB entry 6O93.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
95 99first strand
Strand 2
A
66 70parallel
Strand 3
A
124 128parallel
Strand 4
A
315 320parallel
Strand 5
A
357 359parallel
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il