Analysis of interatomic Contacts of Structural Units in PDB entry:
6O98


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6O98 entry

There are 2 chains in PDB entry 6O98 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 244GLN 466
B
 MET 243PHE 465
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6O98. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
245 263Right-handed alpha
Helix 2
AA2
A
267 274Right-handed alpha
Helix 3
AA3
A
275 277Right-handed 310
Helix 4
AA4
A
280 290Right-handed alpha
Helix 5
AA5
A
291 316Right-handed alpha
Helix 6
AA6
A
317 323Right-handed alpha
Helix 7
AA7
A
324 344Right-handed alpha
Helix 8
AA8
A
363 371Right-handed 310
Helix 9
AA9
A
372 388Right-handed alpha
Helix 10
AB1
A
392 405Right-handed alpha
Helix 11
AB2
A
414 436Right-handed alpha
Helix 12
AB3
A
438 442Right-handed 310
Helix 13
AB4
A
449 463Right-handed alpha
Helix 14
AB5
B
245 263Right-handed alpha
Helix 15
AB6
B
267 274Right-handed alpha
Helix 16
AB7
B
275 277Right-handed 310
Helix 17
AB8
B
280 290Right-handed alpha
Helix 18
AB9
B
291 316Right-handed alpha
Helix 19
AC1
B
317 323Right-handed alpha
Helix 20
AC2
B
324 344Right-handed alpha
Helix 21
AC3
B
363 371Right-handed 310
Helix 22
AC4
B
372 388Right-handed alpha
Helix 23
AC5
B
392 405Right-handed alpha
Helix 24
AC6
B
414 436Right-handed alpha
Helix 25
AC7
B
438 442Right-handed 310
Helix 26
AC8
B
449 465Right-handed alpha
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There are 2 sheets in PDB entry 6O98. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 349first strand
Strand 2
A
354 357anti-parallel
Strand 3
A
360 362anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
348 349first strand
Strand 2
B
354 357anti-parallel
Strand 3
B
360 362anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il