Analysis of interatomic Contacts of Structural Units in PDB entry:
6O9N

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6O9N entry

There are 2 chains in PDB entry 6O9N (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 32	ASP 644
B	LEU 32	ASP 644

There are 55 helices in PDB entry 6O9N. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	44	58	Right-handed alpha
Helix 2	AA2	A	102	106	Right-handed 310
Helix 3	AA3	A	119	124	Right-handed 310
Helix 4	AA4	A	133	145	Right-handed alpha
Helix 5	AA5	A	146	149	Right-handed 310
Helix 6	AA6	A	156	168	Right-handed alpha
Helix 7	AA7	A	174	182	Right-handed alpha
Helix 8	AA8	A	186	190	Right-handed 310
Helix 9	AA9	A	209	219	Right-handed alpha
Helix 10	AB1	A	251	256	Right-handed alpha
Helix 11	AB2	A	257	261	Right-handed 310
Helix 12	AB3	A	317	325	Right-handed alpha
Helix 13	AB4	A	329	336	Right-handed alpha
Helix 14	AB5	A	375	380	Right-handed alpha
Helix 15	AB6	A	380	393	Right-handed alpha
Helix 16	AB7	A	398	402	Right-handed 310
Helix 17	AB8	A	413	418	Right-handed alpha
Helix 18	AB9	A	421	433	Right-handed alpha
Helix 19	AC1	A	435	440	Right-handed 310
Helix 20	AC2	A	447	467	Right-handed alpha
Helix 21	AC3	A	522	541	Right-handed alpha
Helix 22	AC4	A	541	547	Right-handed alpha
Helix 23	AC5	A	555	560	Right-handed alpha
Helix 24	AC6	A	561	573	Right-handed alpha
Helix 25	AC7	A	588	592	Right-handed 310
Helix 26	AC8	A	611	615	Right-handed 310
Helix 27	AC9	A	623	643	Right-handed alpha
Helix 28	AD1	B	44	58	Right-handed alpha
Helix 29	AD2	B	102	106	Right-handed 310
Helix 30	AD3	B	119	124	Right-handed 310
Helix 31	AD4	B	133	145	Right-handed alpha
Helix 32	AD5	B	146	150	Right-handed 310
Helix 33	AD6	B	156	167	Right-handed alpha
Helix 34	AD7	B	174	182	Right-handed alpha
Helix 35	AD8	B	186	190	Right-handed 310
Helix 36	AD9	B	208	219	Right-handed alpha
Helix 37	AE1	B	251	256	Right-handed alpha
Helix 38	AE2	B	257	261	Right-handed 310
Helix 39	AE3	B	313	325	Right-handed alpha
Helix 40	AE4	B	329	336	Right-handed alpha
Helix 41	AE5	B	374	380	Right-handed alpha
Helix 42	AE6	B	380	391	Right-handed alpha
Helix 43	AE7	B	398	402	Right-handed 310
Helix 44	AE8	B	413	418	Right-handed alpha
Helix 45	AE9	B	421	433	Right-handed alpha
Helix 46	AF1	B	435	440	Right-handed 310
Helix 47	AF2	B	441	446	Right-handed alpha
Helix 48	AF3	B	447	467	Right-handed alpha
Helix 49	AF4	B	522	537	Right-handed alpha
Helix 50	AF5	B	538	540	Right-handed 310
Helix 51	AF6	B	541	547	Right-handed alpha
Helix 52	AF7	B	555	561	Right-handed alpha
Helix 53	AF8	B	561	573	Right-handed alpha
Helix 54	AF9	B	588	592	Right-handed 310
Helix 55	AG1	B	623	643	Right-handed alpha

There are 16 sheets in PDB entry 6O9N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	266	269	first strand
Strand 2	A	63	66	parallel
Strand 3	A	35	41	parallel
Strand 4	A	300	311	parallel
Strand 5	A	289	294	anti-parallel
Strand 6	A	272	278	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	266	269	first strand
Strand 2	A	63	66	parallel
Strand 3	A	35	41	parallel
Strand 4	A	300	311	parallel
Strand 5	A	607	609	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	94	98	first strand
Strand 2	A	111	115	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	169	170	first strand
Strand 2	A	198	200	parallel
Strand 3	A	240	241	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	234	237	first strand
Strand 2	A	407	412	anti-parallel
Strand 3	A	471	477	anti-parallel
Strand 4	A	491	492	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	327	328	first strand
Strand 2	A	342	343	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	487	489	first strand
Strand 2	A	358	363	anti-parallel
Strand 3	A	549	553	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	500	502	first strand
Strand 2	A	513	515	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	266	269	first strand
Strand 2	B	63	66	parallel
Strand 3	B	35	41	parallel
Strand 4	B	300	311	parallel
Strand 5	B	289	294	anti-parallel
Strand 6	B	272	278	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	266	269	first strand
Strand 2	B	63	66	parallel
Strand 3	B	35	41	parallel
Strand 4	B	300	311	parallel
Strand 5	B	607	609	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	94	98	first strand
Strand 2	B	111	115	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	169	170	first strand
Strand 2	B	198	199	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	234	237	first strand
Strand 2	B	407	412	anti-parallel
Strand 3	B	471	477	anti-parallel
Strand 4	B	491	492	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	327	328	first strand
Strand 2	B	342	343	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	487	489	first strand
Strand 2	B	358	363	anti-parallel
Strand 3	B	549	553	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	500	502	first strand
Strand 2	B	513	515	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6O9N

Analysis of interatomic Contacts of Structural Units in PDB entry:
6O9N