Analysis of interatomic Contacts of Structural Units in PDB entry:
6O9Z

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6O9Z entry

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 14 chains in PDB entry 6O9Z (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 41	SER 466
B	PRO 41	SER 466
C	GLY 8	LEU 351
D	GLY 8	LEU 351
E	GLN 166	VAL 518
F	GLN 166	VAL 518
G	MET 1	LEU 305
H	MET 1	LEU 305
I	MET 1	ARG 295
J	MET 1	ARG 295
L	CYS 5	LEU 50
L	ARG 52	ASN 180
M	CYS 5	LEU 50
M	ARG 52	ASN 180

There are134 helices in PDB entry 6O9Z. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	64	68	Right-handed 310
Helix 2	AA2	A	74	87	Right-handed alpha
Helix 3	AA3	A	98	108	Right-handed alpha
Helix 4	AA4	A	130	142	Right-handed alpha
Helix 5	AA5	A	161	175	Right-handed alpha
Helix 6	AA6	A	228	234	Right-handed alpha
Helix 7	AA7	A	253	263	Right-handed alpha
Helix 8	AA8	A	268	278	Right-handed alpha
Helix 9	AA9	A	302	315	Right-handed alpha
Helix 10	AB1	A	339	341	Right-handed 310
Helix 11	AB2	B	64	68	Right-handed 310
Helix 12	AB3	B	74	87	Right-handed alpha
Helix 13	AB4	B	98	108	Right-handed alpha
Helix 14	AB5	B	130	142	Right-handed alpha
Helix 15	AB6	B	161	175	Right-handed alpha
Helix 16	AB7	B	228	234	Right-handed alpha
Helix 17	AB8	B	253	263	Right-handed alpha
Helix 18	AB9	B	268	278	Right-handed alpha
Helix 19	AC1	B	302	315	Right-handed alpha
Helix 20	AC2	B	339	341	Right-handed 310
Helix 21	AC3	C	9	25	Right-handed alpha
Helix 22	AC4	C	30	47	Right-handed alpha
Helix 23	AC5	C	53	72	Right-handed alpha
Helix 24	AC6	C	76	98	Right-handed alpha
Helix 25	AC7	C	128	146	Right-handed alpha
Helix 26	AC8	C	146	154	Right-handed alpha
Helix 27	AC9	C	155	158	Right-handed 310
Helix 28	AD1	C	171	182	Right-handed alpha
Helix 29	AD2	C	199	208	Right-handed alpha
Helix 30	AD3	C	221	226	Right-handed alpha
Helix 31	AD4	C	250	261	Right-handed alpha
Helix 32	AD5	C	296	304	Right-handed 310
Helix 33	AD6	C	317	321	Right-handed 310
Helix 34	AD7	C	332	334	Right-handed 310
Helix 35	AD8	C	335	344	Right-handed alpha
Helix 36	AD9	C	345	349	Right-handed 310
Helix 37	AE1	D	9	25	Right-handed alpha
Helix 38	AE2	D	30	48	Right-handed alpha
Helix 39	AE3	D	53	72	Right-handed alpha
Helix 40	AE4	D	76	98	Right-handed alpha
Helix 41	AE5	D	126	145	Right-handed alpha
Helix 42	AE6	D	146	154	Right-handed alpha
Helix 43	AE7	D	155	158	Right-handed 310
Helix 44	AE8	D	171	182	Right-handed alpha
Helix 45	AE9	D	199	208	Right-handed alpha
Helix 46	AF1	D	221	226	Right-handed alpha
Helix 47	AF2	D	250	261	Right-handed alpha
Helix 48	AF3	D	296	304	Right-handed 310
Helix 49	AF4	D	317	321	Right-handed 310
Helix 50	AF5	D	335	344	Right-handed alpha
Helix 51	AF6	E	191	196	Right-handed 310
Helix 52	AF7	E	204	216	Right-handed alpha
Helix 53	AF8	E	221	239	Right-handed alpha
Helix 54	AF9	E	247	267	Right-handed alpha
Helix 55	AG1	E	270	286	Right-handed alpha
Helix 56	AG2	E	292	312	Right-handed alpha
Helix 57	AG3	E	312	325	Right-handed alpha
Helix 58	AG4	E	339	353	Right-handed alpha
Helix 59	AG5	E	368	379	Right-handed alpha
Helix 60	AG6	E	390	395	Right-handed alpha
Helix 61	AG7	E	418	430	Right-handed alpha
Helix 62	AG8	E	439	443	Right-handed 310
Helix 63	AG9	E	459	463	Right-handed 310
Helix 64	AH1	E	511	518	Right-handed alpha
Helix 65	AH2	F	191	196	Right-handed 310
Helix 66	AH3	F	204	216	Right-handed alpha
Helix 67	AH4	F	221	239	Right-handed alpha
Helix 68	AH5	F	247	267	Right-handed alpha
Helix 69	AH6	F	270	286	Right-handed alpha
Helix 70	AH7	F	292	312	Right-handed alpha
Helix 71	AH8	F	312	325	Right-handed alpha
Helix 72	AH9	F	339	353	Right-handed alpha
Helix 73	AI1	F	368	379	Right-handed alpha
Helix 74	AI2	F	390	395	Right-handed alpha
Helix 75	AI3	F	418	430	Right-handed alpha
Helix 76	AI4	F	439	443	Right-handed 310
Helix 77	AI5	F	459	463	Right-handed 310
Helix 78	AI6	F	511	518	Right-handed alpha
Helix 79	AI7	G	3	16	Right-handed alpha
Helix 80	AI8	G	21	36	Right-handed alpha
Helix 81	AI9	G	45	60	Right-handed alpha
Helix 82	AJ1	G	62	77	Right-handed alpha
Helix 83	AJ2	G	86	116	Right-handed alpha
Helix 84	AJ3	G	117	119	Right-handed 310
Helix 85	AJ4	G	131	144	Right-handed alpha
Helix 86	AJ5	G	160	170	Right-handed alpha
Helix 87	AJ6	G	179	183	Right-handed 310
Helix 88	AJ7	G	211	222	Right-handed alpha
Helix 89	AJ8	G	247	252	Right-handed alpha
Helix 90	AJ9	G	277	281	Right-handed 310
Helix 91	AK1	G	292	305	Right-handed alpha
Helix 92	AK2	H	3	16	Right-handed alpha
Helix 93	AK3	H	21	36	Right-handed alpha
Helix 94	AK4	H	45	60	Right-handed alpha
Helix 95	AK5	H	62	77	Right-handed alpha
Helix 96	AK6	H	86	116	Right-handed alpha
Helix 97	AK7	H	117	119	Right-handed 310
Helix 98	AK8	H	131	144	Right-handed alpha
Helix 99	AK9	H	160	170	Right-handed alpha
Helix 100	AL1	H	179	183	Right-handed 310
Helix 101	AL2	H	211	222	Right-handed alpha
Helix 102	AL3	H	247	252	Right-handed alpha
Helix 103	AL4	H	277	281	Right-handed 310
Helix 104	AL5	H	292	305	Right-handed alpha
Helix 105	AL6	I	36	46	Right-handed alpha
Helix 106	AL7	I	62	68	Right-handed alpha
Helix 107	AL8	I	85	93	Right-handed alpha
Helix 108	AL9	I	94	97	Right-handed 310
Helix 109	AM1	I	114	124	Right-handed alpha
Helix 110	AM2	I	183	190	Right-handed alpha
Helix 111	AM3	I	208	218	Right-handed alpha
Helix 112	AM4	I	227	236	Right-handed alpha
Helix 113	AM5	I	282	292	Right-handed alpha
Helix 114	AM6	J	36	46	Right-handed alpha
Helix 115	AM7	J	62	68	Right-handed alpha
Helix 116	AM8	J	85	93	Right-handed alpha
Helix 117	AM9	J	94	97	Right-handed 310
Helix 118	AN1	J	114	124	Right-handed alpha
Helix 119	AN2	J	183	190	Right-handed alpha
Helix 120	AN3	J	208	218	Right-handed alpha
Helix 121	AN4	J	227	236	Right-handed alpha
Helix 122	AN5	J	282	292	Right-handed alpha
Helix 123	AN6	L	48	52	Right-handed 310
Helix 124	AN7	L	90	118	Right-handed alpha
Helix 125	AN8	L	122	142	Right-handed alpha
Helix 126	AN9	L	145	158	Right-handed alpha
Helix 127	AO1	L	159	163	Right-handed 310
Helix 128	AO2	L	168	180	Right-handed alpha
Helix 129	AO3	M	48	52	Right-handed 310
Helix 130	AO4	M	90	118	Right-handed alpha
Helix 131	AO5	M	122	142	Right-handed alpha
Helix 132	AO6	M	145	158	Right-handed alpha
Helix 133	AO7	M	159	163	Right-handed 310
Helix 134	AO8	M	168	180	Right-handed alpha

There are 34 sheets in PDB entry 6O9Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	122	124	first strand
Strand 2	A	90	95	parallel
Strand 3	A	44	48	parallel
Strand 4	A	149	152	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	155	157	first strand
Strand 2	A	297	299	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	244	246	first strand
Strand 2	A	182	187	anti-parallel
Strand 3	A	287	292	parallel
Strand 4	A	211	217	anti-parallel
Strand 5	A	201	206	anti-parallel
Strand 6	A	238	241	anti-parallel
Strand 7	I	192	196	anti-parallel
Strand 8	I	157	161	anti-parallel
Strand 9	I	167	171	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	224	225	first strand
Strand 2	I	181	182	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	336	337	first strand
Strand 2	A	343	344	anti-parallel
Strand 3	A	361	362	parallel
Strand 4	A	378	379	parallel
Strand 5	A	395	396	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	355	356	first strand
Strand 2	A	373	375	parallel
Strand 3	A	390	392	parallel
Strand 4	A	407	409	parallel
Strand 5	A	424	425	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	367	368	first strand
Strand 2	A	384	385	parallel
Strand 3	A	401	402	parallel
Strand 4	A	418	419	parallel
Strand 5	A	436	437	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	411	413	first strand
Strand 2	A	429	431	parallel
Strand 3	A	447	450	parallel
Strand 4	A	458	459	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	122	124	first strand
Strand 2	B	90	95	parallel
Strand 3	B	44	48	parallel
Strand 4	B	149	152	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	155	157	first strand
Strand 2	B	297	299	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	244	246	first strand
Strand 2	B	182	187	anti-parallel
Strand 3	B	287	292	parallel
Strand 4	B	211	217	anti-parallel
Strand 5	B	201	206	anti-parallel
Strand 6	B	238	241	anti-parallel
Strand 7	J	192	196	anti-parallel
Strand 8	J	157	161	anti-parallel
Strand 9	J	167	171	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	224	225	first strand
Strand 2	J	181	182	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	336	337	first strand
Strand 2	B	343	344	anti-parallel
Strand 3	B	361	362	parallel
Strand 4	B	378	379	parallel
Strand 5	B	395	396	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	355	356	first strand
Strand 2	B	373	375	parallel
Strand 3	B	390	392	parallel
Strand 4	B	407	409	parallel
Strand 5	B	424	425	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	367	368	first strand
Strand 2	B	384	385	parallel
Strand 3	B	401	402	parallel
Strand 4	B	418	419	parallel
Strand 5	B	436	437	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	411	413	first strand
Strand 2	B	429	431	parallel
Strand 3	B	447	450	parallel
Strand 4	B	458	459	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	329	331	first strand
Strand 2	C	323	326	anti-parallel
Strand 3	C	265	268	parallel
Strand 4	C	231	234	parallel
Strand 5	C	164	168	parallel
Strand 6	C	188	192	parallel
Strand 7	C	214	217	parallel
Strand 8	F	482	484	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	238	239	first strand
Strand 2	C	245	248	anti-parallel
Strand 3	C	313	316	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	306	308	first strand
Strand 2	F	383	387	parallel
Strand 3	F	357	362	parallel
Strand 4	F	332	336	parallel
Strand 5	F	400	404	parallel
Strand 6	F	434	437	parallel
Strand 7	F	499	502	parallel
Strand 8	F	505	508	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	329	331	first strand
Strand 2	D	323	326	anti-parallel
Strand 3	D	265	268	parallel
Strand 4	D	231	234	parallel
Strand 5	D	164	168	parallel
Strand 6	D	188	192	parallel
Strand 7	D	214	217	parallel
Strand 8	E	482	484	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	238	239	first strand
Strand 2	D	245	248	anti-parallel
Strand 3	D	313	316	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	306	308	first strand
Strand 2	E	383	387	parallel
Strand 3	E	357	362	parallel
Strand 4	E	332	336	parallel
Strand 5	E	400	404	parallel
Strand 6	E	434	437	parallel
Strand 7	E	499	502	parallel
Strand 8	E	505	508	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	407	408	first strand
Strand 2	E	414	417	anti-parallel
Strand 3	E	489	492	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	407	408	first strand
Strand 2	F	414	417	anti-parallel
Strand 3	F	489	492	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	175	178	first strand
Strand 2	G	148	153	parallel
Strand 3	G	123	127	parallel
Strand 4	G	192	195	parallel
Strand 5	G	226	229	parallel
Strand 6	G	283	286	parallel
Strand 7	G	289	291	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	199	200	first strand
Strand 2	G	206	208	anti-parallel
Strand 3	G	274	276	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	175	178	first strand
Strand 2	H	148	153	parallel
Strand 3	H	123	127	parallel
Strand 4	H	192	195	parallel
Strand 5	H	226	229	parallel
Strand 6	H	283	286	parallel
Strand 7	H	289	291	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	199	200	first strand
Strand 2	H	206	208	anti-parallel
Strand 3	H	274	276	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	75	78	first strand
Strand 2	I	51	54	parallel
Strand 3	I	3	8	parallel
Strand 4	I	100	105	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	200	201	first strand
Strand 2	I	128	133	anti-parallel
Strand 3	I	263	267	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	75	78	first strand
Strand 2	J	51	54	parallel
Strand 3	J	3	8	parallel
Strand 4	J	100	105	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	200	201	first strand
Strand 2	J	128	133	anti-parallel
Strand 3	J	263	267	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	18	26	first strand
Strand 2	L	30	35	anti-parallel
Strand 3	L	41	46	anti-parallel
Strand 4	L	81	85	parallel
Strand 5	L	67	76	anti-parallel
Strand 6	L	18	26	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	18	26	first strand
Strand 2	M	30	35	anti-parallel
Strand 3	M	41	46	anti-parallel
Strand 4	M	81	85	parallel
Strand 5	M	67	76	anti-parallel
Strand 6	M	18	26	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6O9Z

Analysis of interatomic Contacts of Structural Units in PDB entry:
6O9Z