Analysis of interatomic Contacts of Structural Units in PDB entry:
6OA9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6OA9 entry

There are 10 chains in PDB entry 6OA9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 209	PHE 791
B	ASN 209	ILE 713
C	ASN 209	ILE 713
D	ASN 209	GLN 718
E	ASN 209	ALA 715
F	ASN 209	PHE 791
K	GLN 2	GLN 49
H	MET 101	GLY 176
J	MET 201	GLY 276
G	ILE 113	GLY 580

There are164 helices in PDB entry 6OA9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	219	236	Right-handed alpha
Helix 2	AA2	A	237	244	Right-handed alpha
Helix 3	AA3	A	260	273	Right-handed alpha
Helix 4	AA4	A	281	286	Right-handed alpha
Helix 5	AA5	A	288	306	Right-handed alpha
Helix 6	AA6	A	315	320	Right-handed alpha
Helix 7	AA7	A	329	332	Right-handed 310
Helix 8	AA8	A	333	343	Right-handed alpha
Helix 9	AA9	A	364	368	Right-handed 310
Helix 10	AB1	A	383	395	Right-handed alpha
Helix 11	AB2	A	407	413	Right-handed alpha
Helix 12	AB3	A	417	436	Right-handed alpha
Helix 13	AB4	A	458	469	Right-handed alpha
Helix 14	AB5	A	485	489	Right-handed 310
Helix 15	AB6	A	495	500	Right-handed alpha
Helix 16	AB7	A	504	509	Right-handed alpha
Helix 17	AB8	A	535	539	Right-handed 310
Helix 18	AB9	A	566	578	Right-handed alpha
Helix 19	AC1	A	592	597	Right-handed alpha
Helix 20	AC2	A	610	621	Right-handed alpha
Helix 21	AC3	A	622	626	Right-handed 310
Helix 22	AC4	A	635	639	Right-handed 310
Helix 23	AC5	A	663	669	Right-handed alpha
Helix 24	AC6	A	696	704	Right-handed alpha
Helix 25	AC7	A	705	709	Right-handed 310
Helix 26	AC8	A	755	760	Right-handed alpha
Helix 27	AC9	A	761	765	Right-handed 310
Helix 28	AD1	A	770	779	Right-handed alpha
Helix 29	AD2	A	784	788	Right-handed 310
Helix 30	AD3	B	219	228	Right-handed alpha
Helix 31	AD4	B	231	236	Right-handed alpha
Helix 32	AD5	B	260	271	Right-handed alpha
Helix 33	AD6	B	291	305	Right-handed alpha
Helix 34	AD7	B	316	319	Right-handed 310
Helix 35	AD8	B	322	326	Right-handed 310
Helix 36	AD9	B	329	344	Right-handed alpha
Helix 37	AE1	B	364	368	Right-handed 310
Helix 38	AE2	B	383	393	Right-handed alpha
Helix 39	AE3	B	405	413	Right-handed alpha
Helix 40	AE4	B	419	436	Right-handed alpha
Helix 41	AE5	B	458	469	Right-handed alpha
Helix 42	AE6	B	495	500	Right-handed alpha
Helix 43	AE7	B	504	509	Right-handed alpha
Helix 44	AE8	B	510	517	Right-handed alpha
Helix 45	AE9	B	566	579	Right-handed alpha
Helix 46	AF1	B	588	592	Right-handed 310
Helix 47	AF2	B	612	620	Right-handed alpha
Helix 48	AF3	B	635	639	Right-handed 310
Helix 49	AF4	B	640	645	Right-handed 310
Helix 50	AF5	B	659	668	Right-handed alpha
Helix 51	AF6	B	682	687	Right-handed alpha
Helix 52	AF7	B	693	713	Right-handed alpha
Helix 53	AF8	C	212	216	Right-handed 310
Helix 54	AF9	C	219	227	Right-handed alpha
Helix 55	AG1	C	227	232	Right-handed alpha
Helix 56	AG2	C	236	240	Right-handed 310
Helix 57	AG3	C	260	271	Right-handed alpha
Helix 58	AG4	C	290	305	Right-handed alpha
Helix 59	AG5	C	330	344	Right-handed alpha
Helix 60	AG6	C	386	395	Right-handed alpha
Helix 61	AG7	C	406	411	Right-handed alpha
Helix 62	AG8	C	418	433	Right-handed alpha
Helix 63	AG9	C	458	468	Right-handed alpha
Helix 64	AH1	C	485	489	Right-handed 310
Helix 65	AH2	C	492	499	Right-handed alpha
Helix 66	AH3	C	500	502	Right-handed 310
Helix 67	AH4	C	510	517	Right-handed alpha
Helix 68	AH5	C	535	545	Right-handed alpha
Helix 69	AH6	C	553	558	Right-handed alpha
Helix 70	AH7	C	562	566	Right-handed 310
Helix 71	AH8	C	567	579	Right-handed alpha
Helix 72	AH9	C	588	592	Right-handed 310
Helix 73	AI1	C	610	618	Right-handed alpha
Helix 74	AI2	C	622	626	Right-handed 310
Helix 75	AI3	C	663	672	Right-handed alpha
Helix 76	AI4	C	681	687	Right-handed alpha
Helix 77	AI5	C	695	704	Right-handed alpha
Helix 78	AI6	D	212	216	Right-handed 310
Helix 79	AI7	D	219	228	Right-handed alpha
Helix 80	AI8	D	231	236	Right-handed alpha
Helix 81	AI9	D	238	244	Right-handed alpha
Helix 82	AJ1	D	260	271	Right-handed alpha
Helix 83	AJ2	D	280	285	Right-handed alpha
Helix 84	AJ3	D	291	306	Right-handed alpha
Helix 85	AJ4	D	315	320	Right-handed alpha
Helix 86	AJ5	D	334	343	Right-handed alpha
Helix 87	AJ6	D	383	394	Right-handed alpha
Helix 88	AJ7	D	406	412	Right-handed alpha
Helix 89	AJ8	D	417	435	Right-handed alpha
Helix 90	AJ9	D	461	469	Right-handed alpha
Helix 91	AK1	D	492	501	Right-handed alpha
Helix 92	AK2	D	504	509	Right-handed alpha
Helix 93	AK3	D	537	543	Right-handed alpha
Helix 94	AK4	D	570	579	Right-handed alpha
Helix 95	AK5	D	609	618	Right-handed alpha
Helix 96	AK6	D	661	671	Right-handed alpha
Helix 97	AK7	D	682	689	Right-handed alpha
Helix 98	AK8	D	693	714	Right-handed alpha
Helix 99	AK9	E	222	236	Right-handed alpha
Helix 100	AL1	E	260	273	Right-handed alpha
Helix 101	AL2	E	280	285	Right-handed alpha
Helix 102	AL3	E	288	305	Right-handed alpha
Helix 103	AL4	E	316	319	Right-handed 310
Helix 104	AL5	E	331	342	Right-handed alpha
Helix 105	AL6	E	364	368	Right-handed 310
Helix 106	AL7	E	387	397	Right-handed alpha
Helix 107	AL8	E	405	411	Right-handed alpha
Helix 108	AL9	E	420	437	Right-handed alpha
Helix 109	AM1	E	452	456	Right-handed 310
Helix 110	AM2	E	458	468	Right-handed alpha
Helix 111	AM3	E	492	499	Right-handed alpha
Helix 112	AM4	E	504	509	Right-handed alpha
Helix 113	AM5	E	511	517	Right-handed alpha
Helix 114	AM6	E	538	543	Right-handed alpha
Helix 115	AM7	E	572	579	Right-handed alpha
Helix 116	AM8	E	589	592	Right-handed 310
Helix 117	AM9	E	601	621	Right-handed alpha
Helix 118	AN1	E	663	669	Right-handed 310
Helix 119	AN2	E	681	687	Right-handed alpha
Helix 120	AN3	E	703	708	Right-handed alpha
Helix 121	AN4	E	709	713	Right-handed 310
Helix 122	AN5	F	222	230	Right-handed alpha
Helix 123	AN6	F	230	236	Right-handed alpha
Helix 124	AN7	F	260	273	Right-handed alpha
Helix 125	AN8	F	281	286	Right-handed alpha
Helix 126	AN9	F	288	301	Right-handed alpha
Helix 127	AO1	F	302	304	Right-handed 310
Helix 128	AO2	F	332	343	Right-handed alpha
Helix 129	AO3	F	359	363	Right-handed 310
Helix 130	AO4	F	385	395	Right-handed alpha
Helix 131	AO5	F	407	413	Right-handed alpha
Helix 132	AO6	F	417	435	Right-handed alpha
Helix 133	AO7	F	458	467	Right-handed alpha
Helix 134	AO8	F	485	489	Right-handed 310
Helix 135	AO9	F	492	501	Right-handed alpha
Helix 136	AP1	F	510	515	Right-handed alpha
Helix 137	AP2	F	533	540	Right-handed alpha
Helix 138	AP3	F	540	545	Right-handed alpha
Helix 139	AP4	F	555	560	Right-handed alpha
Helix 140	AP5	F	567	572	Right-handed alpha
Helix 141	AP6	F	572	579	Right-handed alpha
Helix 142	AP7	F	610	618	Right-handed alpha
Helix 143	AP8	F	659	671	Right-handed alpha
Helix 144	AP9	F	682	687	Right-handed alpha
Helix 145	AQ1	F	699	704	Right-handed alpha
Helix 146	AQ2	F	705	707	Right-handed 310
Helix 147	AQ3	F	709	714	Right-handed alpha
Helix 148	AQ4	K	22	31	Right-handed alpha
Helix 149	AQ5	H	122	135	Right-handed alpha
Helix 150	AQ6	J	223	234	Right-handed alpha
Helix 151	AQ7	J	255	260	Right-handed alpha
Helix 152	AQ8	G	116	125	Right-handed alpha
Helix 153	AQ9	G	155	162	Right-handed alpha
Helix 154	AR1	G	168	181	Right-handed alpha
Helix 155	AR2	G	243	256	Right-handed alpha
Helix 156	AR3	G	299	318	Right-handed alpha
Helix 157	AR4	G	351	365	Right-handed alpha
Helix 158	AR5	G	405	410	Right-handed alpha
Helix 159	AR6	G	501	508	Right-handed alpha
Helix 160	AR7	G	516	525	Right-handed alpha
Helix 161	AR8	G	526	537	Right-handed alpha
Helix 162	AR9	G	540	553	Right-handed alpha
Helix 163	AS1	G	556	566	Right-handed alpha
Helix 164	AS2	G	566	579	Right-handed alpha

There are 18 sheets in PDB entry 6OA9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	275	279	first strand
Strand 2	A	309	313	parallel
Strand 3	A	352	356	parallel
Strand 4	A	250	254	parallel
Strand 5	A	375	378	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	549	552	first strand
Strand 2	A	583	587	parallel
Strand 3	A	629	632	parallel
Strand 4	A	523	527	parallel
Strand 5	A	651	654	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	277	279	first strand
Strand 2	B	309	314	parallel
Strand 3	B	351	356	parallel
Strand 4	B	251	254	parallel
Strand 5	B	375	378	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	523	526	first strand
Strand 2	B	627	632	parallel
Strand 3	B	582	586	parallel
Strand 4	B	548	549	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	275	276	first strand
Strand 2	C	309	314	parallel
Strand 3	C	351	357	parallel
Strand 4	C	250	254	parallel
Strand 5	C	376	378	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	629	630	first strand
Strand 2	C	523	527	parallel
Strand 3	C	651	654	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	548	549	first strand
Strand 2	C	582	583	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	375	378	first strand
Strand 2	D	250	254	parallel
Strand 3	D	351	356	parallel
Strand 4	D	309	313	parallel
Strand 5	D	275	279	parallel
Strand 6	G	143	144	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	548	551	first strand
Strand 2	D	582	586	parallel
Strand 3	D	628	632	parallel
Strand 4	D	523	527	parallel
Strand 5	D	651	654	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	275	276	first strand
Strand 2	E	309	314	parallel
Strand 3	E	351	356	parallel
Strand 4	E	250	254	parallel
Strand 5	E	375	378	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	548	553	first strand
Strand 2	E	582	587	parallel
Strand 3	E	629	632	parallel
Strand 4	E	524	527	parallel
Strand 5	E	651	654	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	275	280	first strand
Strand 2	F	309	314	parallel
Strand 3	F	352	357	parallel
Strand 4	F	251	254	parallel
Strand 5	F	376	378	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	523	527	first strand
Strand 2	F	649	654	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	550	551	first strand
Strand 2	F	582	585	parallel
Strand 3	F	627	630	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	112	116	first strand
Strand 2	H	102	106	anti-parallel
Strand 3	H	166	171	parallel
Strand 4	H	141	145	anti-parallel
Strand 5	H	148	149	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	212	216	first strand
Strand 2	J	202	206	anti-parallel
Strand 3	J	265	270	parallel
Strand 4	J	242	245	anti-parallel
Strand 5	J	248	249	anti-parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	236	238	first strand
Strand 2	G	276	285	parallel
Strand 3	G	260	270	anti-parallel
Strand 4	G	320	327	anti-parallel
Strand 5	G	382	386	parallel
Strand 6	G	397	401	anti-parallel
Strand 7	G	463	465	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	422	423	first strand
Strand 2	G	457	458	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6OA9

Analysis of interatomic Contacts of Structural Units in PDB entry:
6OA9