Analysis of interatomic Contacts of Structural Units in PDB entry:
6OAB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OAB entry

There are 6 chains in PDB entry 6OAB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 ASN 209PHE 791
E
 ASN 209GLN 670
B
 ASN 209ARG 717
C
 ASN 209GLN 782
A
 ASN 209ARG 717
H
 ALA 1ALA 24
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are114 helices in PDB entry 6OAB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
D
222 236Right-handed alpha
Helix 2
AA2
D
262 273Right-handed alpha
Helix 3
AA3
D
293 305Right-handed alpha
Helix 4
AA4
D
330 341Right-handed alpha
Helix 5
AA5
D
359 363Right-handed 310
Helix 6
AA6
D
386 392Right-handed alpha
Helix 7
AA7
D
418 436Right-handed alpha
Helix 8
AA8
D
458 467Right-handed alpha
Helix 9
AA9
D
471 475Right-handed 310
Helix 10
AB1
D
492 504Right-handed alpha
Helix 11
AB2
D
504 509Right-handed alpha
Helix 12
AB3
D
510 517Right-handed alpha
Helix 13
AB4
D
535 541Right-handed alpha
Helix 14
AB5
D
566 578Right-handed alpha
Helix 15
AB6
D
589 592Right-handed 310
Helix 16
AB7
D
608 619Right-handed alpha
Helix 17
AB8
D
664 670Right-handed alpha
Helix 18
AB9
D
682 689Right-handed alpha
Helix 19
AC1
D
693 698Right-handed alpha
Helix 20
AC2
D
701 708Right-handed alpha
Helix 21
AC3
D
709 714Right-handed alpha
Helix 22
AC4
D
770 775Right-handed alpha
Helix 23
AC5
E
220 228Right-handed alpha
Helix 24
AC6
E
230 236Right-handed alpha
Helix 25
AC7
E
236 241Right-handed alpha
Helix 26
AC8
E
261 273Right-handed alpha
Helix 27
AC9
E
280 285Right-handed alpha
Helix 28
AD1
E
290 294Right-handed 310
Helix 29
AD2
E
296 306Right-handed alpha
Helix 30
AD3
E
330 335Right-handed alpha
Helix 31
AD4
E
336 342Right-handed alpha
Helix 32
AD5
E
386 395Right-handed alpha
Helix 33
AD6
E
405 413Right-handed alpha
Helix 34
AD7
E
421 436Right-handed alpha
Helix 35
AD8
E
458 468Right-handed alpha
Helix 36
AD9
E
471 475Right-handed 310
Helix 37
AE1
E
492 503Right-handed alpha
Helix 38
AE2
E
504 509Right-handed alpha
Helix 39
AE3
E
509 517Right-handed alpha
Helix 40
AE4
E
536 545Right-handed alpha
Helix 41
AE5
E
566 579Right-handed alpha
Helix 42
AE6
E
588 592Right-handed 310
Helix 43
AE7
E
608 616Right-handed alpha
Helix 44
AE8
E
640 645Right-handed alpha
Helix 45
AE9
E
659 664Right-handed alpha
Helix 46
AF1
B
219 228Right-handed alpha
Helix 47
AF2
B
230 236Right-handed alpha
Helix 48
AF3
B
262 268Right-handed alpha
Helix 49
AF4
B
291 306Right-handed alpha
Helix 50
AF5
B
333 345Right-handed alpha
Helix 51
AF6
B
359 363Right-handed 310
Helix 52
AF7
B
364 368Right-handed 310
Helix 53
AF8
B
387 395Right-handed alpha
Helix 54
AF9
B
405 413Right-handed alpha
Helix 55
AG1
B
419 436Right-handed alpha
Helix 56
AG2
B
458 466Right-handed alpha
Helix 57
AG3
B
471 475Right-handed 310
Helix 58
AG4
B
495 509Right-handed alpha
Helix 59
AG5
B
511 517Right-handed alpha
Helix 60
AG6
B
535 543Right-handed alpha
Helix 61
AG7
B
563 579Right-handed alpha
Helix 62
AG8
B
589 592Right-handed 310
Helix 63
AG9
B
593 597Right-handed 310
Helix 64
AH1
B
606 620Right-handed alpha
Helix 65
AH2
B
659 671Right-handed alpha
Helix 66
AH3
B
682 689Right-handed alpha
Helix 67
AH4
B
695 716Right-handed alpha
Helix 68
AH5
C
223 231Right-handed alpha
Helix 69
AH6
C
231 236Right-handed alpha
Helix 70
AH7
C
263 268Right-handed alpha
Helix 71
AH8
C
290 306Right-handed alpha
Helix 72
AH9
C
316 319Right-handed 310
Helix 73
AI1
C
330 338Right-handed alpha
Helix 74
AI2
C
364 368Right-handed 310
Helix 75
AI3
C
388 393Right-handed alpha
Helix 76
AI4
C
405 411Right-handed alpha
Helix 77
AI5
C
419 435Right-handed alpha
Helix 78
AI6
C
461 466Right-handed alpha
Helix 79
AI7
C
474 478Right-handed 310
Helix 80
AI8
C
492 509Right-handed alpha
Helix 81
AI9
C
510 517Right-handed alpha
Helix 82
AJ1
C
539 544Right-handed alpha
Helix 83
AJ2
C
563 579Right-handed alpha
Helix 84
AJ3
C
589 592Right-handed 310
Helix 85
AJ4
C
608 619Right-handed alpha
Helix 86
AJ5
C
667 672Right-handed alpha
Helix 87
AJ6
C
682 688Right-handed alpha
Helix 88
AJ7
C
695 711Right-handed alpha
Helix 89
AJ8
C
754 760Right-handed alpha
Helix 90
AJ9
C
770 775Right-handed alpha
Helix 91
AK1
A
219 224Right-handed alpha
Helix 92
AK2
A
230 236Right-handed alpha
Helix 93
AK3
A
262 272Right-handed alpha
Helix 94
AK4
A
281 285Right-handed 310
Helix 95
AK5
A
293 306Right-handed alpha
Helix 96
AK6
A
329 335Right-handed alpha
Helix 97
AK7
A
336 345Right-handed alpha
Helix 98
AK8
A
364 368Right-handed 310
Helix 99
AK9
A
386 393Right-handed alpha
Helix 100
AL1
A
405 413Right-handed alpha
Helix 101
AL2
A
420 436Right-handed alpha
Helix 102
AL3
A
458 464Right-handed alpha
Helix 103
AL4
A
465 467Right-handed 310
Helix 104
AL5
A
493 509Right-handed alpha
Helix 105
AL6
A
510 517Right-handed alpha
Helix 106
AL7
A
535 544Right-handed alpha
Helix 107
AL8
A
553 557Right-handed 310
Helix 108
AL9
A
563 578Right-handed alpha
Helix 109
AM1
A
589 594Right-handed alpha
Helix 110
AM2
A
609 618Right-handed alpha
Helix 111
AM3
A
635 639Right-handed 310
Helix 112
AM4
A
662 671Right-handed alpha
Helix 113
AM5
A
682 689Right-handed alpha
Helix 114
AM6
A
695 716Right-handed alpha
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There are 12 sheets in PDB entry 6OAB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
275 279first strand
Strand 2
D
309 314parallel
Strand 3
D
351 356parallel
Strand 4
D
250 254parallel
Strand 5
D
377 378parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
525 526first strand
Strand 2
D
627 632parallel
Strand 3
D
582 587parallel
Strand 4
D
548 552parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
353 356first strand
Strand 2
E
250 254parallel
Strand 3
E
376 378parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
275 276first strand
Strand 2
E
309 310parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
549 551first strand
Strand 2
E
582 586parallel
Strand 3
E
627 632parallel
Strand 4
E
523 527parallel
Strand 5
E
649 654parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
275 279first strand
Strand 2
B
309 314parallel
Strand 3
B
354 356parallel
Strand 4
B
251 254parallel
Strand 5
B
377 378parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
548 552first strand
Strand 2
B
582 587parallel
Strand 3
B
628 633parallel
Strand 4
B
524 527parallel
Strand 5
B
651 654parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
275 280first strand
Strand 2
C
309 314parallel
Strand 3
C
352 356parallel
Strand 4
C
252 254parallel
Strand 5
C
376 378parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
548 553first strand
Strand 2
C
582 587parallel
Strand 3
C
627 632parallel
Strand 4
C
523 526parallel
Strand 5
C
651 653parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
251 254first strand
Strand 2
A
375 378parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
277 278first strand
Strand 2
A
309 312parallel
Strand 3
A
351 353parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
548 551first strand
Strand 2
A
582 587parallel
Strand 3
A
628 632parallel
Strand 4
A
524 527parallel
Strand 5
A
651 654parallel
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