Analysis of interatomic Contacts of Structural Units in PDB entry:
6OAF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OAF entry

There is 1 chain in PDB entry 6OAF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN -13GLN 356
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6OAF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
0 8Right-handed alpha
Helix 2
AA2
A
12 16Right-handed 310
Helix 3
AA3
A
48 62Right-handed alpha
Helix 4
AA4
A
69 82Right-handed alpha
Helix 5
AA5
A
86 92Right-handed alpha
Helix 6
AA6
A
93 102Right-handed alpha
Helix 7
AA7
A
116 121Right-handed 310
Helix 8
AA8
A
127 137Right-handed alpha
Helix 9
AA9
A
146 156Right-handed alpha
Helix 10
AB1
A
164 182Right-handed alpha
Helix 11
AB2
A
188 192Right-handed 310
Helix 12
AB3
A
193 207Right-handed alpha
Helix 13
AB4
A
207 221Right-handed alpha
Helix 14
AB5
A
226 239Right-handed alpha
Helix 15
AB6
A
244 254Right-handed alpha
Helix 16
AB7
A
266 270Right-handed 310
Helix 17
AB8
A
273 289Right-handed alpha
Helix 18
AB9
A
290 297Right-handed 310
Helix 19
AC1
A
304 312Right-handed 310
Helix 20
AC2
A
313 327Right-handed alpha
Helix 21
AC3
A
337 339Right-handed 310
Helix 22
AC4
A
340 355Right-handed alpha
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There are 2 sheets in PDB entry 6OAF. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
-7 -4first strand
Strand 2
A
255 258anti-parallel
Strand 3
A
262 264anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 45first strand
Strand 2
A
104 110parallel
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