Analysis of interatomic Contacts of Structural Units in PDB entry:
6OAN

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6OAN entry

There are 4 chains in PDB entry 6OAN (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 216	TYR 501
B	VAL 6	GLN 255
C	ASN 216	TYR 501
D	VAL 6	LEU 253

There are 33 helices in PDB entry 6OAN. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	239	244	Right-handed alpha
Helix 2	AA2	A	247	252	Right-handed alpha
Helix 3	AA3	A	265	291	Right-handed alpha
Helix 4	AA4	A	296	316	Right-handed alpha
Helix 5	AA5	A	323	337	Right-handed alpha
Helix 6	AA6	A	341	362	Right-handed alpha
Helix 7	AA7	A	362	369	Right-handed alpha
Helix 8	AA8	A	378	384	Right-handed alpha
Helix 9	AA9	A	387	413	Right-handed alpha
Helix 10	AB1	A	433	463	Right-handed alpha
Helix 11	AB2	A	473	482	Right-handed alpha
Helix 12	AB3	A	486	495	Right-handed alpha
Helix 13	AB4	B	67	71	Right-handed 310
Helix 14	AB5	B	79	81	Right-handed 310
Helix 15	AB6	B	92	96	Right-handed 310
Helix 16	AB7	B	171	175	Right-handed 310
Helix 17	AB8	B	223	227	Right-handed 310
Helix 18	AB9	C	239	244	Right-handed alpha
Helix 19	AC1	C	247	252	Right-handed alpha
Helix 20	AC2	C	267	291	Right-handed alpha
Helix 21	AC3	C	296	316	Right-handed alpha
Helix 22	AC4	C	323	337	Right-handed alpha
Helix 23	AC5	C	341	362	Right-handed alpha
Helix 24	AC6	C	362	369	Right-handed alpha
Helix 25	AC7	C	378	384	Right-handed alpha
Helix 26	AC8	C	387	410	Right-handed alpha
Helix 27	AC9	C	433	463	Right-handed alpha
Helix 28	AD1	C	473	482	Right-handed alpha
Helix 29	AD2	C	486	495	Right-handed alpha
Helix 30	AD3	D	67	71	Right-handed 310
Helix 31	AD4	D	92	96	Right-handed 310
Helix 32	AD5	D	171	175	Right-handed 310
Helix 33	AD6	D	223	227	Right-handed 310

There are 12 sheets in PDB entry 6OAN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	10	11	first strand
Strand 2	B	22	27	anti-parallel
Strand 3	B	83	88	anti-parallel
Strand 4	B	73	78	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	63	65	first strand
Strand 2	B	52	57	anti-parallel
Strand 3	B	38	45	anti-parallel
Strand 4	B	97	105	anti-parallel
Strand 5	B	113	116	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	63	65	first strand
Strand 2	B	52	57	anti-parallel
Strand 3	B	38	45	anti-parallel
Strand 4	B	97	105	anti-parallel
Strand 5	B	120	122	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	154	157	first strand
Strand 2	B	248	252	parallel
Strand 3	B	228	236	anti-parallel
Strand 4	B	178	182	anti-parallel
Strand 5	B	189	192	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	154	157	first strand
Strand 2	B	248	252	parallel
Strand 3	B	228	236	anti-parallel
Strand 4	B	241	244	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	163	168	first strand
Strand 2	B	214	219	anti-parallel
Strand 3	B	206	211	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	7	11	first strand
Strand 2	D	22	29	anti-parallel
Strand 3	D	83	88	anti-parallel
Strand 4	D	73	78	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	15	16	first strand
Strand 2	D	120	124	parallel
Strand 3	D	97	105	anti-parallel
Strand 4	D	38	45	anti-parallel
Strand 5	D	52	57	anti-parallel
Strand 6	D	63	65	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	15	16	first strand
Strand 2	D	120	124	parallel
Strand 3	D	97	105	anti-parallel
Strand 4	D	113	116	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	154	157	first strand
Strand 2	D	248	252	parallel
Strand 3	D	228	236	anti-parallel
Strand 4	D	178	182	anti-parallel
Strand 5	D	189	192	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	154	157	first strand
Strand 2	D	248	252	parallel
Strand 3	D	228	236	anti-parallel
Strand 4	D	241	244	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	163	168	first strand
Strand 2	D	214	219	anti-parallel
Strand 3	D	206	211	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6OAN

Analysis of interatomic Contacts of Structural Units in PDB entry:
6OAN