Analysis of interatomic Contacts of Structural Units in PDB entry:
6OAO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6OAO entry

There are 5 chains in PDB entry 6OAO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 216	SER 508
B	GLN 5	THR 252
C	ASN 216	SER 508
D	GLN 5	THR 252
E	LYS 215	LYS 437

There are112 helices in PDB entry 6OAO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	239	245	Right-handed alpha
Helix 2	AA2	A	247	252	Right-handed alpha
Helix 3	AA3	A	265	269	Right-handed alpha
Helix 4	AA4	A	270	291	Right-handed alpha
Helix 5	AA5	A	296	315	Right-handed alpha
Helix 6	AA6	A	323	334	Right-handed alpha
Helix 7	AA7	A	339	362	Right-handed alpha
Helix 8	AA8	A	362	369	Right-handed alpha
Helix 9	AA9	A	378	383	Right-handed alpha
Helix 10	AB1	A	387	416	Right-handed alpha
Helix 11	AB2	A	424	428	Right-handed 310
Helix 12	AB3	A	429	465	Right-handed alpha
Helix 13	AB4	A	473	482	Right-handed alpha
Helix 14	AB5	A	486	495	Right-handed alpha
Helix 15	AB6	A	498	506	Right-handed alpha
Helix 16	AB7	B	32	36	Right-handed 310
Helix 17	AB8	B	66	69	Right-handed 310
Helix 18	AB9	B	91	95	Right-handed 310
Helix 19	AC1	C	239	245	Right-handed alpha
Helix 20	AC2	C	247	252	Right-handed alpha
Helix 21	AC3	C	265	269	Right-handed alpha
Helix 22	AC4	C	271	291	Right-handed alpha
Helix 23	AC5	C	296	315	Right-handed alpha
Helix 24	AC6	C	323	334	Right-handed alpha
Helix 25	AC7	C	339	362	Right-handed alpha
Helix 26	AC8	C	362	368	Right-handed alpha
Helix 27	AC9	C	378	383	Right-handed alpha
Helix 28	AD1	C	387	416	Right-handed alpha
Helix 29	AD2	C	424	428	Right-handed 310
Helix 30	AD3	C	429	464	Right-handed alpha
Helix 31	AD4	C	473	482	Right-handed alpha
Helix 32	AD5	C	486	495	Right-handed alpha
Helix 33	AD6	C	498	506	Right-handed alpha
Helix 34	AD7	D	32	36	Right-handed 310
Helix 35	AD8	D	66	69	Right-handed 310
Helix 36	AD9	D	91	95	Right-handed 310
Helix 37	AE1	D	224	228	Right-handed 310
Helix 38	AE2	E	239	245	Right-handed alpha
Helix 39	AE3	E	247	252	Right-handed alpha
Helix 40	AE4	E	265	269	Right-handed alpha
Helix 41	AE5	E	270	291	Right-handed alpha
Helix 42	AE6	E	296	315	Right-handed alpha
Helix 43	AE7	E	323	337	Right-handed alpha
Helix 44	AE8	E	339	362	Right-handed alpha
Helix 45	AE9	E	362	368	Right-handed alpha
Helix 46	AF1	E	387	416	Right-handed alpha
Helix 47	AF2	E	424	428	Right-handed 310
Helix 48	AF3	E	429	464	Right-handed alpha
Helix 49	AF4	E	473	482	Right-handed alpha
Helix 50	AF5	E	486	495	Right-handed alpha
Helix 51	AF6	E	498	506	Right-handed alpha
Helix 52	AF7	F	32	36	Right-handed 310
Helix 53	AF8	F	66	69	Right-handed 310
Helix 54	AF9	F	91	95	Right-handed 310
Helix 55	AG1	G	239	245	Right-handed alpha
Helix 56	AG2	G	247	252	Right-handed alpha
Helix 57	AG3	G	265	269	Right-handed alpha
Helix 58	AG4	G	270	291	Right-handed alpha
Helix 59	AG5	G	296	315	Right-handed alpha
Helix 60	AG6	G	323	337	Right-handed alpha
Helix 61	AG7	G	339	352	Right-handed alpha
Helix 62	AG8	G	353	362	Right-handed alpha
Helix 63	AG9	G	362	368	Right-handed alpha
Helix 64	AH1	G	378	383	Right-handed alpha
Helix 65	AH2	G	387	416	Right-handed alpha
Helix 66	AH3	G	424	428	Right-handed 310
Helix 67	AH4	G	429	464	Right-handed alpha
Helix 68	AH5	G	473	482	Right-handed alpha
Helix 69	AH6	G	486	495	Right-handed alpha
Helix 70	AH7	G	498	506	Right-handed alpha
Helix 71	AH8	H	32	36	Right-handed 310
Helix 72	AH9	H	66	69	Right-handed 310
Helix 73	AI1	H	91	95	Right-handed 310
Helix 74	AI2	H	224	228	Right-handed 310
Helix 75	AI3	I	239	245	Right-handed alpha
Helix 76	AI4	I	247	252	Right-handed alpha
Helix 77	AI5	I	265	269	Right-handed alpha
Helix 78	AI6	I	270	291	Right-handed alpha
Helix 79	AI7	I	296	315	Right-handed alpha
Helix 80	AI8	I	323	334	Right-handed alpha
Helix 81	AI9	I	339	352	Right-handed alpha
Helix 82	AJ1	I	353	362	Right-handed alpha
Helix 83	AJ2	I	362	368	Right-handed alpha
Helix 84	AJ3	I	378	383	Right-handed alpha
Helix 85	AJ4	I	387	416	Right-handed alpha
Helix 86	AJ5	I	424	428	Right-handed 310
Helix 87	AJ6	I	429	464	Right-handed alpha
Helix 88	AJ7	I	473	482	Right-handed alpha
Helix 89	AJ8	I	486	495	Right-handed alpha
Helix 90	AJ9	I	498	506	Right-handed alpha
Helix 91	AK1	J	32	36	Right-handed 310
Helix 92	AK2	J	66	69	Right-handed 310
Helix 93	AK3	J	91	95	Right-handed 310
Helix 94	AK4	K	239	245	Right-handed alpha
Helix 95	AK5	K	247	252	Right-handed alpha
Helix 96	AK6	K	265	269	Right-handed alpha
Helix 97	AK7	K	270	291	Right-handed alpha
Helix 98	AK8	K	296	315	Right-handed alpha
Helix 99	AK9	K	323	337	Right-handed alpha
Helix 100	AL1	K	339	362	Right-handed alpha
Helix 101	AL2	K	362	368	Right-handed alpha
Helix 102	AL3	K	378	383	Right-handed alpha
Helix 103	AL4	K	387	416	Right-handed alpha
Helix 104	AL5	K	424	429	Right-handed alpha
Helix 105	AL6	K	429	464	Right-handed alpha
Helix 106	AL7	K	473	482	Right-handed alpha
Helix 107	AL8	K	486	495	Right-handed alpha
Helix 108	AL9	K	498	506	Right-handed alpha
Helix 109	AM1	L	32	36	Right-handed 310
Helix 110	AM2	L	66	69	Right-handed 310
Helix 111	AM3	L	91	95	Right-handed 310
Helix 112	AM4	L	224	228	Right-handed 310

There are 33 sheets in PDB entry 6OAO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	7	10	first strand
Strand 2	B	22	29	anti-parallel
Strand 3	B	82	87	anti-parallel
Strand 4	B	72	77	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	14	15	first strand
Strand 2	B	119	122	parallel
Strand 3	B	96	102	anti-parallel
Strand 4	B	39	43	anti-parallel
Strand 5	B	49	54	anti-parallel
Strand 6	B	63	64	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	14	15	first strand
Strand 2	B	119	122	parallel
Strand 3	B	96	102	anti-parallel
Strand 4	B	114	115	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	149	150	first strand
Strand 2	B	161	167	anti-parallel
Strand 3	B	215	221	anti-parallel
Strand 4	B	207	212	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	190	193	first strand
Strand 2	B	178	183	anti-parallel
Strand 3	B	230	237	anti-parallel
Strand 4	B	242	245	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	7	10	first strand
Strand 2	D	22	29	anti-parallel
Strand 3	D	82	87	anti-parallel
Strand 4	D	72	77	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	14	15	first strand
Strand 2	D	119	122	parallel
Strand 3	D	96	102	anti-parallel
Strand 4	D	39	43	anti-parallel
Strand 5	D	49	56	anti-parallel
Strand 6	D	60	64	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	14	15	first strand
Strand 2	D	119	122	parallel
Strand 3	D	96	102	anti-parallel
Strand 4	D	114	115	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	149	150	first strand
Strand 2	D	162	167	anti-parallel
Strand 3	D	215	220	anti-parallel
Strand 4	D	207	212	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	191	193	first strand
Strand 2	D	178	183	anti-parallel
Strand 3	D	230	237	anti-parallel
Strand 4	D	242	245	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	191	193	first strand
Strand 2	D	178	183	anti-parallel
Strand 3	D	230	237	anti-parallel
Strand 4	D	249	250	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	7	10	first strand
Strand 2	F	22	29	anti-parallel
Strand 3	F	82	87	anti-parallel
Strand 4	F	72	77	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	14	16	first strand
Strand 2	F	119	123	parallel
Strand 3	F	96	102	anti-parallel
Strand 4	F	39	43	anti-parallel
Strand 5	F	49	54	anti-parallel
Strand 6	F	63	64	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	14	16	first strand
Strand 2	F	119	123	parallel
Strand 3	F	96	102	anti-parallel
Strand 4	F	114	115	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	149	150	first strand
Strand 2	F	162	167	anti-parallel
Strand 3	F	215	220	anti-parallel
Strand 4	F	207	212	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	190	193	first strand
Strand 2	F	178	183	anti-parallel
Strand 3	F	230	237	anti-parallel
Strand 4	F	242	245	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	190	193	first strand
Strand 2	F	178	183	anti-parallel
Strand 3	F	230	237	anti-parallel
Strand 4	F	249	250	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	7	10	first strand
Strand 2	H	22	29	anti-parallel
Strand 3	H	82	87	anti-parallel
Strand 4	H	72	77	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	14	15	first strand
Strand 2	H	119	122	parallel
Strand 3	H	96	102	anti-parallel
Strand 4	H	39	43	anti-parallel
Strand 5	H	49	54	anti-parallel
Strand 6	H	63	64	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	14	15	first strand
Strand 2	H	119	122	parallel
Strand 3	H	96	102	anti-parallel
Strand 4	H	114	115	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	149	150	first strand
Strand 2	H	162	167	anti-parallel
Strand 3	H	215	220	anti-parallel
Strand 4	H	207	212	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	190	193	first strand
Strand 2	H	178	183	anti-parallel
Strand 3	H	230	237	anti-parallel
Strand 4	H	242	245	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	190	193	first strand
Strand 2	H	178	183	anti-parallel
Strand 3	H	230	237	anti-parallel
Strand 4	H	249	250	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	7	10	first strand
Strand 2	J	22	29	anti-parallel
Strand 3	J	82	87	anti-parallel
Strand 4	J	72	77	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	14	16	first strand
Strand 2	J	119	123	parallel
Strand 3	J	96	102	anti-parallel
Strand 4	J	39	43	anti-parallel
Strand 5	J	49	54	anti-parallel
Strand 6	J	63	64	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	14	16	first strand
Strand 2	J	119	123	parallel
Strand 3	J	96	102	anti-parallel
Strand 4	J	114	115	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	149	150	first strand
Strand 2	J	162	167	anti-parallel
Strand 3	J	215	220	anti-parallel
Strand 4	J	207	212	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	191	193	first strand
Strand 2	J	178	183	anti-parallel
Strand 3	J	230	237	anti-parallel
Strand 4	J	242	245	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	7	10	first strand
Strand 2	L	22	29	anti-parallel
Strand 3	L	82	87	anti-parallel
Strand 4	L	72	77	anti-parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	14	15	first strand
Strand 2	L	119	122	parallel
Strand 3	L	96	102	anti-parallel
Strand 4	L	39	43	anti-parallel
Strand 5	L	49	54	anti-parallel
Strand 6	L	63	64	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	14	15	first strand
Strand 2	L	119	122	parallel
Strand 3	L	96	102	anti-parallel
Strand 4	L	114	115	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	149	150	first strand
Strand 2	L	162	167	anti-parallel
Strand 3	L	215	220	anti-parallel
Strand 4	L	207	212	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	190	193	first strand
Strand 2	L	178	183	anti-parallel
Strand 3	L	230	237	anti-parallel
Strand 4	L	242	245	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6OAO

Analysis of interatomic Contacts of Structural Units in PDB entry:
6OAO