Analysis of interatomic Contacts of Structural Units in PDB entry:
6OAU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6OAU entry

There are 4 chains in PDB entry 6OAU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 30	ASN 471
B	GLN 30	ASN 471
C	LEU 63	SER 143
D	LEU 63	SER 144

There are 25 helices in PDB entry 6OAU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	30	35	Right-handed 310
Helix 2	AA2	A	60	67	Right-handed alpha
Helix 3	AA3	A	90	103	Right-handed alpha
Helix 4	AA4	A	113	118	Right-handed alpha
Helix 5	AA5	A	120	125	Right-handed alpha
Helix 6	AA6	A	127	147	Right-handed alpha
Helix 7	AA7	A	149	151	Right-handed 310
Helix 8	AA8	A	159	170	Right-handed alpha
Helix 9	AA9	A	193	197	Right-handed 310
Helix 10	AB1	A	199	201	Right-handed 310
Helix 11	AB2	A	261	281	Right-handed alpha
Helix 12	AB3	A	293	299	Right-handed alpha
Helix 13	AB4	B	30	35	Right-handed 310
Helix 14	AB5	B	60	67	Right-handed alpha
Helix 15	AB6	B	90	103	Right-handed alpha
Helix 16	AB7	B	113	118	Right-handed alpha
Helix 17	AB8	B	120	127	Right-handed alpha
Helix 18	AB9	B	127	147	Right-handed alpha
Helix 19	AC1	B	149	151	Right-handed 310
Helix 20	AC2	B	159	170	Right-handed alpha
Helix 21	AC3	B	193	197	Right-handed 310
Helix 22	AC4	B	199	201	Right-handed 310
Helix 23	AC5	B	261	281	Right-handed alpha
Helix 24	AC6	B	293	299	Right-handed alpha
Helix 25	AC7	D	139	143	Right-handed 310

There are 10 sheets in PDB entry 6OAU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	55	56	first strand
Strand 2	A	40	44	anti-parallel
Strand 3	A	107	112	anti-parallel
Strand 4	A	75	79	parallel
Strand 5	A	153	158	parallel
Strand 6	A	176	182	parallel
Strand 7	A	203	209	parallel
Strand 8	A	230	234	parallel
Strand 9	A	326	330	parallel
Strand 10	A	287	290	anti-parallel
Strand 11	A	310	312	anti-parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	372	384	first strand
Strand 2	A	356	368	anti-parallel
Strand 3	A	402	409	anti-parallel
Strand 4	A	460	469	anti-parallel
Strand 5	A	440	446	anti-parallel
Strand 6	A	430	435	anti-parallel
Strand 7	A	341	349	anti-parallel
Strand 8	A	387	395	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	425	428	first strand
Strand 2	A	451	454	anti-parallel

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There are 11 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	55	56	first strand
Strand 2	B	40	44	anti-parallel
Strand 3	B	107	112	anti-parallel
Strand 4	B	75	79	parallel
Strand 5	B	153	158	parallel
Strand 6	B	176	182	parallel
Strand 7	B	203	209	parallel
Strand 8	B	230	234	parallel
Strand 9	B	326	330	parallel
Strand 10	B	287	290	anti-parallel
Strand 11	B	310	312	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	372	384	first strand
Strand 2	B	356	368	anti-parallel
Strand 3	B	402	409	anti-parallel
Strand 4	B	460	469	anti-parallel
Strand 5	B	440	446	anti-parallel
Strand 6	B	430	435	anti-parallel
Strand 7	B	341	349	anti-parallel
Strand 8	B	387	395	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	425	428	first strand
Strand 2	B	451	454	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	64	66	first strand
Strand 2	C	80	82	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	68	72	first strand
Strand 2	C	101	111	anti-parallel
Strand 3	C	88	98	anti-parallel
Strand 4	C	124	131	anti-parallel
Strand 5	C	117	120	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	64	66	first strand
Strand 2	D	80	82	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	68	72	first strand
Strand 2	D	101	111	anti-parallel
Strand 3	D	88	98	anti-parallel
Strand 4	D	124	131	anti-parallel
Strand 5	D	117	120	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6OAU

Analysis of interatomic Contacts of Structural Units in PDB entry:
6OAU