Analysis of interatomic Contacts of Structural Units in PDB entry:
6OAW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OAW entry

There are 2 chains in PDB entry 6OAW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 3MSE 392
B
 LEU 2GLU 391
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 6OAW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 44Right-handed alpha
Helix 2
AA2
A
53 71Right-handed alpha
Helix 3
AA3
A
76 81Right-handed 310
Helix 4
AA4
A
90 96Right-handed alpha
Helix 5
AA5
A
102 121Right-handed alpha
Helix 6
AA6
A
137 145Right-handed alpha
Helix 7
AA7
A
149 156Right-handed alpha
Helix 8
AA8
A
159 174Right-handed alpha
Helix 9
AA9
A
175 184Right-handed alpha
Helix 10
AB1
A
184 199Right-handed alpha
Helix 11
AB2
A
271 278Right-handed alpha
Helix 12
AB3
A
285 298Right-handed alpha
Helix 13
AB4
A
314 324Right-handed alpha
Helix 14
AB5
A
331 335Right-handed 310
Helix 15
AB6
A
348 357Right-handed alpha
Helix 16
AB7
A
358 361Right-handed 310
Helix 17
AB8
A
368 389Right-handed alpha
Helix 18
AB9
B
28 44Right-handed alpha
Helix 19
AC1
B
53 71Right-handed alpha
Helix 20
AC2
B
76 81Right-handed 310
Helix 21
AC3
B
90 96Right-handed alpha
Helix 22
AC4
B
102 122Right-handed alpha
Helix 23
AC5
B
137 145Right-handed alpha
Helix 24
AC6
B
149 156Right-handed alpha
Helix 25
AC7
B
159 172Right-handed alpha
Helix 26
AC8
B
175 184Right-handed alpha
Helix 27
AC9
B
184 199Right-handed alpha
Helix 28
AD1
B
271 278Right-handed alpha
Helix 29
AD2
B
285 298Right-handed alpha
Helix 30
AD3
B
314 324Right-handed alpha
Helix 31
AD4
B
331 335Right-handed 310
Helix 32
AD5
B
348 357Right-handed alpha
Helix 33
AD6
B
358 361Right-handed 310
Helix 34
AD7
B
368 389Right-handed alpha
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There are 10 sheets in PDB entry 6OAW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 27first strand
Strand 2
A
130 135anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
252 257first strand
Strand 2
A
236 242anti-parallel
Strand 3
A
218 229anti-parallel
Strand 4
A
204 210anti-parallel
Strand 5
A
261 262anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
252 257first strand
Strand 2
A
236 242anti-parallel
Strand 3
A
218 229anti-parallel
Strand 4
A
204 210anti-parallel
Strand 5
A
268 269anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
279 280first strand
Strand 2
A
283 284anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
341 345first strand
Strand 2
A
309 313anti-parallel
Strand 3
A
363 367anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 27first strand
Strand 2
B
130 135anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
252 257first strand
Strand 2
B
236 242anti-parallel
Strand 3
B
218 229anti-parallel
Strand 4
B
204 210anti-parallel
Strand 5
B
261 262anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
252 257first strand
Strand 2
B
236 242anti-parallel
Strand 3
B
218 229anti-parallel
Strand 4
B
204 210anti-parallel
Strand 5
B
268 269anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
279 280first strand
Strand 2
B
283 284anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
341 345first strand
Strand 2
B
309 313anti-parallel
Strand 3
B
363 367anti-parallel
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