Analysis of interatomic Contacts of Structural Units in PDB entry:
6OAZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6OAZ entry

There are 4 chains in PDB entry 6OAZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 30	ASN 471
B	GLN 30	ASN 471
C	GLN 30	ASN 471
D	GLN 30	GLU 38

There are 55 helices in PDB entry 6OAZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	60	67	Right-handed alpha
Helix 2	AA2	A	90	103	Right-handed alpha
Helix 3	AA3	A	113	118	Right-handed alpha
Helix 4	AA4	A	120	127	Right-handed alpha
Helix 5	AA5	A	127	146	Right-handed alpha
Helix 6	AA6	A	149	151	Right-handed 310
Helix 7	AA7	A	160	172	Right-handed alpha
Helix 8	AA8	A	193	197	Right-handed 310
Helix 9	AA9	A	199	203	Right-handed 310
Helix 10	AB1	A	236	238	Right-handed 310
Helix 11	AB2	A	265	281	Right-handed alpha
Helix 12	AB3	A	293	298	Right-handed alpha
Helix 13	AB4	A	305	308	Right-handed 310
Helix 14	AB5	B	30	34	Right-handed 310
Helix 15	AB6	B	60	67	Right-handed alpha
Helix 16	AB7	B	90	103	Right-handed alpha
Helix 17	AB8	B	113	118	Right-handed alpha
Helix 18	AB9	B	120	127	Right-handed alpha
Helix 19	AC1	B	127	147	Right-handed alpha
Helix 20	AC2	B	149	151	Right-handed 310
Helix 21	AC3	B	160	172	Right-handed alpha
Helix 22	AC4	B	193	197	Right-handed 310
Helix 23	AC5	B	199	203	Right-handed 310
Helix 24	AC6	B	236	238	Right-handed 310
Helix 25	AC7	B	265	281	Right-handed alpha
Helix 26	AC8	B	293	299	Right-handed alpha
Helix 27	AC9	B	305	308	Right-handed 310
Helix 28	AD1	C	30	34	Right-handed 310
Helix 29	AD2	C	60	67	Right-handed alpha
Helix 30	AD3	C	90	103	Right-handed alpha
Helix 31	AD4	C	113	118	Right-handed alpha
Helix 32	AD5	C	120	127	Right-handed alpha
Helix 33	AD6	C	127	147	Right-handed alpha
Helix 34	AD7	C	149	151	Right-handed 310
Helix 35	AD8	C	159	172	Right-handed alpha
Helix 36	AD9	C	193	197	Right-handed 310
Helix 37	AE1	C	199	203	Right-handed 310
Helix 38	AE2	C	236	238	Right-handed 310
Helix 39	AE3	C	265	281	Right-handed alpha
Helix 40	AE4	C	293	299	Right-handed alpha
Helix 41	AE5	C	305	308	Right-handed 310
Helix 42	AE6	D	30	34	Right-handed 310
Helix 43	AE7	D	60	67	Right-handed alpha
Helix 44	AE8	D	90	103	Right-handed alpha
Helix 45	AE9	D	113	118	Right-handed alpha
Helix 46	AF1	D	120	127	Right-handed alpha
Helix 47	AF2	D	127	147	Right-handed alpha
Helix 48	AF3	D	160	172	Right-handed alpha
Helix 49	AF4	D	193	197	Right-handed 310
Helix 50	AF5	D	199	203	Right-handed 310
Helix 51	AF6	D	265	281	Right-handed alpha
Helix 52	AF7	D	293	299	Right-handed alpha
Helix 53	AF8	D	305	308	Right-handed 310
Helix 54	AF9	F	139	143	Right-handed 310
Helix 55	AG1	G	139	143	Right-handed 310

There are 19 sheets in PDB entry 6OAZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	55	56	first strand
Strand 2	A	40	44	anti-parallel
Strand 3	A	107	112	anti-parallel
Strand 4	A	75	79	parallel
Strand 5	A	153	159	parallel
Strand 6	A	178	184	parallel
Strand 7	A	205	209	parallel
Strand 8	A	230	234	parallel
Strand 9	A	326	330	parallel
Strand 10	A	287	290	anti-parallel
Strand 11	A	310	312	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	372	384	first strand
Strand 2	A	356	368	anti-parallel
Strand 3	A	402	410	anti-parallel
Strand 4	A	460	469	anti-parallel
Strand 5	A	440	446	anti-parallel
Strand 6	A	430	435	anti-parallel
Strand 7	A	341	349	anti-parallel
Strand 8	A	387	395	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	425	428	first strand
Strand 2	A	451	454	anti-parallel

Back to list of sheets
Back to top of page

There are 11 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	55	56	first strand
Strand 2	B	40	44	anti-parallel
Strand 3	B	107	112	anti-parallel
Strand 4	B	75	79	parallel
Strand 5	B	153	159	parallel
Strand 6	B	178	184	parallel
Strand 7	B	205	209	parallel
Strand 8	B	230	234	parallel
Strand 9	B	326	330	parallel
Strand 10	B	287	290	anti-parallel
Strand 11	B	310	312	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	372	384	first strand
Strand 2	B	356	368	anti-parallel
Strand 3	B	402	410	anti-parallel
Strand 4	B	460	469	anti-parallel
Strand 5	B	440	446	anti-parallel
Strand 6	B	430	435	anti-parallel
Strand 7	B	341	349	anti-parallel
Strand 8	B	387	395	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	425	428	first strand
Strand 2	B	451	454	anti-parallel

Back to list of sheets
Back to top of page

There are 11 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	55	56	first strand
Strand 2	C	40	44	anti-parallel
Strand 3	C	107	112	anti-parallel
Strand 4	C	75	79	parallel
Strand 5	C	153	158	parallel
Strand 6	C	178	182	parallel
Strand 7	C	205	209	parallel
Strand 8	C	230	234	parallel
Strand 9	C	326	330	parallel
Strand 10	C	287	290	anti-parallel
Strand 11	C	310	312	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	372	384	first strand
Strand 2	C	356	368	anti-parallel
Strand 3	C	402	410	anti-parallel
Strand 4	C	460	469	anti-parallel
Strand 5	C	440	446	anti-parallel
Strand 6	C	430	435	anti-parallel
Strand 7	C	341	349	anti-parallel
Strand 8	C	387	395	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	425	428	first strand
Strand 2	C	451	454	anti-parallel

Back to list of sheets
Back to top of page

There are 11 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	55	56	first strand
Strand 2	D	40	44	anti-parallel
Strand 3	D	107	112	anti-parallel
Strand 4	D	75	79	parallel
Strand 5	D	153	158	parallel
Strand 6	D	178	182	parallel
Strand 7	D	205	209	parallel
Strand 8	D	230	234	parallel
Strand 9	D	326	330	parallel
Strand 10	D	287	290	anti-parallel
Strand 11	D	310	312	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	372	384	first strand
Strand 2	D	356	368	anti-parallel
Strand 3	D	402	410	anti-parallel
Strand 4	D	460	469	anti-parallel
Strand 5	D	440	446	anti-parallel
Strand 6	D	430	435	anti-parallel
Strand 7	D	341	349	anti-parallel
Strand 8	D	387	395	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	425	428	first strand
Strand 2	D	451	454	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	64	66	first strand
Strand 2	E	80	82	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	68	72	first strand
Strand 2	E	102	111	anti-parallel
Strand 3	E	88	97	anti-parallel
Strand 4	E	124	131	anti-parallel
Strand 5	E	118	121	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	68	72	first strand
Strand 2	F	102	111	anti-parallel
Strand 3	F	88	97	anti-parallel
Strand 4	F	124	131	anti-parallel
Strand 5	F	117	121	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	64	66	first strand
Strand 2	G	80	82	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	68	72	first strand
Strand 2	G	102	111	anti-parallel
Strand 3	G	88	97	anti-parallel
Strand 4	G	124	131	anti-parallel
Strand 5	G	117	121	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	64	66	first strand
Strand 2	H	80	82	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	68	72	first strand
Strand 2	H	102	111	anti-parallel
Strand 3	H	88	97	anti-parallel
Strand 4	H	124	131	anti-parallel
Strand 5	H	117	121	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6OAZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
6OAZ