Analysis of interatomic Contacts of Structural Units in PDB entry:
6OBT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OBT entry

There is 1 chain in PDB entry 6OBT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 31GLN 359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 6OBT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 36Right-handed 310
Helix 2
AA2
A
67 71Right-handed 310
Helix 3
AA3
A
82 98Right-handed alpha
Helix 4
AA4
A
180 188Right-handed alpha
Helix 5
AA5
A
194 197Right-handed 310
Helix 6
AA6
A
227 237Right-handed alpha
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There are 2 sheets in PDB entry 6OBT. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 14 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 39first strand
Strand 2
A
47 50anti-parallel
Strand 3
A
55 62anti-parallel
Strand 4
A
119 127anti-parallel
Strand 5
A
134 142anti-parallel
Strand 6
A
148 156anti-parallel
Strand 7
A
101 107anti-parallel
Strand 8
A
304 313anti-parallel
Strand 9
A
341 351anti-parallel
Strand 10
A
331 336anti-parallel
Strand 11
A
320 326anti-parallel
Strand 12
A
208 214anti-parallel
Strand 13
A
199 205anti-parallel
Strand 14
A
174 176anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 79first strand
Strand 2
A
73 75anti-parallel
Strand 3
A
190 192anti-parallel
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