Analysis of interatomic Contacts of Structural Units in PDB entry:
6OD7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6OD7 entry

There are 12 chains in PDB entry 6OD7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 33	ALA 623
B	THR 33	ALA 623
C	THR 33	ALA 623
D	THR 33	ALA 623
E	THR 33	ALA 623
F	THR 33	ALA 623
G	THR 33	ALA 623
H	THR 33	ALA 623
I	THR 33	ALA 623
J	THR 33	ALA 623
K	THR 33	ALA 623
L	THR 33	ALA 623

There are228 helices in PDB entry 6OD7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	33	44	Right-handed alpha
Helix 2	AA2	A	50	54	Right-handed 310
Helix 3	AA3	A	55	60	Right-handed alpha
Helix 4	AA4	A	62	78	Right-handed alpha
Helix 5	AA5	A	82	98	Right-handed alpha
Helix 6	AA6	A	101	109	Right-handed alpha
Helix 7	AA7	A	114	138	Right-handed alpha
Helix 8	AA8	A	138	150	Right-handed alpha
Helix 9	AA9	A	156	168	Right-handed alpha
Helix 10	AB1	A	180	190	Right-handed alpha
Helix 11	AB2	A	196	208	Right-handed alpha
Helix 12	AB3	A	208	222	Right-handed alpha
Helix 13	AB4	A	271	297	Right-handed alpha
Helix 14	AB5	A	521	540	Right-handed alpha
Helix 15	AB6	A	548	551	Right-handed 310
Helix 16	AB7	A	558	565	Right-handed alpha
Helix 17	AB8	A	565	575	Right-handed alpha
Helix 18	AB9	A	591	603	Right-handed alpha
Helix 19	AC1	A	605	623	Right-handed alpha
Helix 20	AC2	B	34	44	Right-handed alpha
Helix 21	AC3	B	50	54	Right-handed 310
Helix 22	AC4	B	55	60	Right-handed alpha
Helix 23	AC5	B	62	78	Right-handed alpha
Helix 24	AC6	B	82	98	Right-handed alpha
Helix 25	AC7	B	101	109	Right-handed alpha
Helix 26	AC8	B	114	138	Right-handed alpha
Helix 27	AC9	B	138	150	Right-handed alpha
Helix 28	AD1	B	156	168	Right-handed alpha
Helix 29	AD2	B	180	190	Right-handed alpha
Helix 30	AD3	B	196	208	Right-handed alpha
Helix 31	AD4	B	208	222	Right-handed alpha
Helix 32	AD5	B	271	297	Right-handed alpha
Helix 33	AD6	B	521	540	Right-handed alpha
Helix 34	AD7	B	548	551	Right-handed 310
Helix 35	AD8	B	558	565	Right-handed alpha
Helix 36	AD9	B	565	575	Right-handed alpha
Helix 37	AE1	B	591	603	Right-handed alpha
Helix 38	AE2	B	605	623	Right-handed alpha
Helix 39	AE3	C	34	44	Right-handed alpha
Helix 40	AE4	C	50	54	Right-handed 310
Helix 41	AE5	C	55	60	Right-handed alpha
Helix 42	AE6	C	62	78	Right-handed alpha
Helix 43	AE7	C	82	98	Right-handed alpha
Helix 44	AE8	C	101	109	Right-handed alpha
Helix 45	AE9	C	114	138	Right-handed alpha
Helix 46	AF1	C	138	150	Right-handed alpha
Helix 47	AF2	C	156	168	Right-handed alpha
Helix 48	AF3	C	180	190	Right-handed alpha
Helix 49	AF4	C	196	208	Right-handed alpha
Helix 50	AF5	C	208	222	Right-handed alpha
Helix 51	AF6	C	271	297	Right-handed alpha
Helix 52	AF7	C	521	540	Right-handed alpha
Helix 53	AF8	C	548	551	Right-handed 310
Helix 54	AF9	C	558	565	Right-handed alpha
Helix 55	AG1	C	565	575	Right-handed alpha
Helix 56	AG2	C	591	603	Right-handed alpha
Helix 57	AG3	C	605	623	Right-handed alpha
Helix 58	AG4	D	34	44	Right-handed alpha
Helix 59	AG5	D	50	54	Right-handed 310
Helix 60	AG6	D	55	60	Right-handed alpha
Helix 61	AG7	D	62	78	Right-handed alpha
Helix 62	AG8	D	82	98	Right-handed alpha
Helix 63	AG9	D	101	109	Right-handed alpha
Helix 64	AH1	D	114	138	Right-handed alpha
Helix 65	AH2	D	138	150	Right-handed alpha
Helix 66	AH3	D	156	168	Right-handed alpha
Helix 67	AH4	D	180	190	Right-handed alpha
Helix 68	AH5	D	196	208	Right-handed alpha
Helix 69	AH6	D	208	222	Right-handed alpha
Helix 70	AH7	D	271	297	Right-handed alpha
Helix 71	AH8	D	521	540	Right-handed alpha
Helix 72	AH9	D	548	551	Right-handed 310
Helix 73	AI1	D	558	565	Right-handed alpha
Helix 74	AI2	D	565	575	Right-handed alpha
Helix 75	AI3	D	591	603	Right-handed alpha
Helix 76	AI4	D	605	623	Right-handed alpha
Helix 77	AI5	E	34	44	Right-handed alpha
Helix 78	AI6	E	50	54	Right-handed 310
Helix 79	AI7	E	55	60	Right-handed alpha
Helix 80	AI8	E	62	78	Right-handed alpha
Helix 81	AI9	E	82	98	Right-handed alpha
Helix 82	AJ1	E	101	109	Right-handed alpha
Helix 83	AJ2	E	114	138	Right-handed alpha
Helix 84	AJ3	E	138	150	Right-handed alpha
Helix 85	AJ4	E	156	168	Right-handed alpha
Helix 86	AJ5	E	180	190	Right-handed alpha
Helix 87	AJ6	E	196	208	Right-handed alpha
Helix 88	AJ7	E	208	222	Right-handed alpha
Helix 89	AJ8	E	271	297	Right-handed alpha
Helix 90	AJ9	E	521	540	Right-handed alpha
Helix 91	AK1	E	548	551	Right-handed 310
Helix 92	AK2	E	558	565	Right-handed alpha
Helix 93	AK3	E	565	575	Right-handed alpha
Helix 94	AK4	E	591	603	Right-handed alpha
Helix 95	AK5	E	605	623	Right-handed alpha
Helix 96	AK6	F	34	44	Right-handed alpha
Helix 97	AK7	F	50	54	Right-handed 310
Helix 98	AK8	F	55	60	Right-handed alpha
Helix 99	AK9	F	62	78	Right-handed alpha
Helix 100	AL1	F	82	98	Right-handed alpha
Helix 101	AL2	F	101	109	Right-handed alpha
Helix 102	AL3	F	114	138	Right-handed alpha
Helix 103	AL4	F	138	150	Right-handed alpha
Helix 104	AL5	F	156	168	Right-handed alpha
Helix 105	AL6	F	180	190	Right-handed alpha
Helix 106	AL7	F	196	208	Right-handed alpha
Helix 107	AL8	F	208	222	Right-handed alpha
Helix 108	AL9	F	271	297	Right-handed alpha
Helix 109	AM1	F	521	540	Right-handed alpha
Helix 110	AM2	F	548	551	Right-handed 310
Helix 111	AM3	F	558	565	Right-handed alpha
Helix 112	AM4	F	565	575	Right-handed alpha
Helix 113	AM5	F	591	603	Right-handed alpha
Helix 114	AM6	F	605	623	Right-handed alpha
Helix 115	AM7	G	34	44	Right-handed alpha
Helix 116	AM8	G	50	54	Right-handed 310
Helix 117	AM9	G	55	60	Right-handed alpha
Helix 118	AN1	G	62	78	Right-handed alpha
Helix 119	AN2	G	82	98	Right-handed alpha
Helix 120	AN3	G	101	109	Right-handed alpha
Helix 121	AN4	G	114	138	Right-handed alpha
Helix 122	AN5	G	138	150	Right-handed alpha
Helix 123	AN6	G	156	168	Right-handed alpha
Helix 124	AN7	G	180	190	Right-handed alpha
Helix 125	AN8	G	196	208	Right-handed alpha
Helix 126	AN9	G	208	222	Right-handed alpha
Helix 127	AO1	G	271	297	Right-handed alpha
Helix 128	AO2	G	521	540	Right-handed alpha
Helix 129	AO3	G	548	551	Right-handed 310
Helix 130	AO4	G	558	565	Right-handed alpha
Helix 131	AO5	G	565	575	Right-handed alpha
Helix 132	AO6	G	591	603	Right-handed alpha
Helix 133	AO7	G	605	623	Right-handed alpha
Helix 134	AO8	H	34	44	Right-handed alpha
Helix 135	AO9	H	50	54	Right-handed 310
Helix 136	AP1	H	55	60	Right-handed alpha
Helix 137	AP2	H	62	78	Right-handed alpha
Helix 138	AP3	H	82	98	Right-handed alpha
Helix 139	AP4	H	101	109	Right-handed alpha
Helix 140	AP5	H	114	138	Right-handed alpha
Helix 141	AP6	H	138	150	Right-handed alpha
Helix 142	AP7	H	156	168	Right-handed alpha
Helix 143	AP8	H	180	190	Right-handed alpha
Helix 144	AP9	H	196	208	Right-handed alpha
Helix 145	AQ1	H	208	222	Right-handed alpha
Helix 146	AQ2	H	271	297	Right-handed alpha
Helix 147	AQ3	H	521	540	Right-handed alpha
Helix 148	AQ4	H	548	551	Right-handed 310
Helix 149	AQ5	H	558	565	Right-handed alpha
Helix 150	AQ6	H	565	575	Right-handed alpha
Helix 151	AQ7	H	591	603	Right-handed alpha
Helix 152	AQ8	H	605	623	Right-handed alpha
Helix 153	AQ9	I	34	44	Right-handed alpha
Helix 154	AR1	I	50	54	Right-handed 310
Helix 155	AR2	I	55	60	Right-handed alpha
Helix 156	AR3	I	62	78	Right-handed alpha
Helix 157	AR4	I	82	98	Right-handed alpha
Helix 158	AR5	I	101	109	Right-handed alpha
Helix 159	AR6	I	114	138	Right-handed alpha
Helix 160	AR7	I	138	150	Right-handed alpha
Helix 161	AR8	I	156	168	Right-handed alpha
Helix 162	AR9	I	180	190	Right-handed alpha
Helix 163	AS1	I	196	208	Right-handed alpha
Helix 164	AS2	I	208	222	Right-handed alpha
Helix 165	AS3	I	271	297	Right-handed alpha
Helix 166	AS4	I	521	540	Right-handed alpha
Helix 167	AS5	I	548	551	Right-handed 310
Helix 168	AS6	I	558	565	Right-handed alpha
Helix 169	AS7	I	565	575	Right-handed alpha
Helix 170	AS8	I	591	603	Right-handed alpha
Helix 171	AS9	I	605	623	Right-handed alpha
Helix 172	AT1	J	34	44	Right-handed alpha
Helix 173	AT2	J	50	54	Right-handed 310
Helix 174	AT3	J	55	60	Right-handed alpha
Helix 175	AT4	J	62	78	Right-handed alpha
Helix 176	AT5	J	82	98	Right-handed alpha
Helix 177	AT6	J	101	109	Right-handed alpha
Helix 178	AT7	J	114	138	Right-handed alpha
Helix 179	AT8	J	138	150	Right-handed alpha
Helix 180	AT9	J	156	168	Right-handed alpha
Helix 181	AU1	J	180	190	Right-handed alpha
Helix 182	AU2	J	196	208	Right-handed alpha
Helix 183	AU3	J	208	222	Right-handed alpha
Helix 184	AU4	J	271	297	Right-handed alpha
Helix 185	AU5	J	521	540	Right-handed alpha
Helix 186	AU6	J	548	551	Right-handed 310
Helix 187	AU7	J	558	565	Right-handed alpha
Helix 188	AU8	J	565	575	Right-handed alpha
Helix 189	AU9	J	591	603	Right-handed alpha
Helix 190	AV1	J	605	623	Right-handed alpha
Helix 191	AV2	K	34	44	Right-handed alpha
Helix 192	AV3	K	50	54	Right-handed 310
Helix 193	AV4	K	55	60	Right-handed alpha
Helix 194	AV5	K	62	78	Right-handed alpha
Helix 195	AV6	K	82	98	Right-handed alpha
Helix 196	AV7	K	101	109	Right-handed alpha
Helix 197	AV8	K	114	138	Right-handed alpha
Helix 198	AV9	K	138	150	Right-handed alpha
Helix 199	AW1	K	156	168	Right-handed alpha
Helix 200	AW2	K	180	190	Right-handed alpha
Helix 201	AW3	K	196	208	Right-handed alpha
Helix 202	AW4	K	208	222	Right-handed alpha
Helix 203	AW5	K	271	297	Right-handed alpha
Helix 204	AW6	K	521	540	Right-handed alpha
Helix 205	AW7	K	548	551	Right-handed 310
Helix 206	AW8	K	558	565	Right-handed alpha
Helix 207	AW9	K	565	575	Right-handed alpha
Helix 208	AX1	K	591	603	Right-handed alpha
Helix 209	AX2	K	605	623	Right-handed alpha
Helix 210	AX3	L	34	44	Right-handed alpha
Helix 211	AX4	L	50	54	Right-handed 310
Helix 212	AX5	L	55	60	Right-handed alpha
Helix 213	AX6	L	62	78	Right-handed alpha
Helix 214	AX7	L	82	98	Right-handed alpha
Helix 215	AX8	L	101	109	Right-handed alpha
Helix 216	AX9	L	114	138	Right-handed alpha
Helix 217	AY1	L	138	150	Right-handed alpha
Helix 218	AY2	L	156	168	Right-handed alpha
Helix 219	AY3	L	180	190	Right-handed alpha
Helix 220	AY4	L	196	208	Right-handed alpha
Helix 221	AY5	L	208	222	Right-handed alpha
Helix 222	AY6	L	271	297	Right-handed alpha
Helix 223	AY7	L	521	540	Right-handed alpha
Helix 224	AY8	L	548	551	Right-handed 310
Helix 225	AY9	L	558	565	Right-handed alpha
Helix 226	AZ1	L	565	575	Right-handed alpha
Helix 227	AZ2	L	591	603	Right-handed alpha
Helix 228	AZ3	L	605	623	Right-handed alpha

There are 36 sheets in PDB entry 6OD7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	223	224	first strand
Strand 2	A	170	173	anti-parallel
Strand 3	A	254	256	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	261	263	first strand
Strand 2	A	267	269	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	542	546	first strand
Strand 2	A	553	557	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	223	224	first strand
Strand 2	B	170	173	anti-parallel
Strand 3	B	254	256	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	261	263	first strand
Strand 2	B	267	269	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	542	546	first strand
Strand 2	B	553	557	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	223	224	first strand
Strand 2	C	170	173	anti-parallel
Strand 3	C	254	256	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	261	263	first strand
Strand 2	C	267	269	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	542	546	first strand
Strand 2	C	553	557	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	223	224	first strand
Strand 2	D	170	173	anti-parallel
Strand 3	D	254	256	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	261	263	first strand
Strand 2	D	267	269	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	542	546	first strand
Strand 2	D	553	557	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	223	224	first strand
Strand 2	E	170	173	anti-parallel
Strand 3	E	254	256	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	261	263	first strand
Strand 2	E	267	269	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	542	546	first strand
Strand 2	E	553	557	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	223	224	first strand
Strand 2	F	170	173	anti-parallel
Strand 3	F	254	256	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	261	263	first strand
Strand 2	F	267	269	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	542	546	first strand
Strand 2	F	553	557	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	223	224	first strand
Strand 2	G	170	173	anti-parallel
Strand 3	G	254	256	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	261	263	first strand
Strand 2	G	267	269	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	542	546	first strand
Strand 2	G	553	557	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	223	224	first strand
Strand 2	H	170	173	anti-parallel
Strand 3	H	254	256	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	261	263	first strand
Strand 2	H	267	269	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	542	546	first strand
Strand 2	H	553	557	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	223	224	first strand
Strand 2	I	170	173	anti-parallel
Strand 3	I	254	256	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	261	263	first strand
Strand 2	I	267	269	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	542	546	first strand
Strand 2	I	553	557	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	223	224	first strand
Strand 2	J	170	173	anti-parallel
Strand 3	J	254	256	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	261	263	first strand
Strand 2	J	267	269	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	542	546	first strand
Strand 2	J	553	557	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	223	224	first strand
Strand 2	K	170	173	anti-parallel
Strand 3	K	254	256	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	261	263	first strand
Strand 2	K	267	269	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	542	546	first strand
Strand 2	K	553	557	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	223	224	first strand
Strand 2	L	170	173	anti-parallel
Strand 3	L	254	256	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	261	263	first strand
Strand 2	L	267	269	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	542	546	first strand
Strand 2	L	553	557	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6OD7

Analysis of interatomic Contacts of Structural Units in PDB entry:
6OD7