Analysis of interatomic Contacts of Structural Units in PDB entry:
6OE8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6OE8 entry

There are 4 chains in PDB entry 6OE8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 11	CYS 302
B	THR 11	CYS 302
C	THR 11	CYS 302
D	THR 11	CYS 302

There are 28 helices in PDB entry 6OE8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	52	59	Right-handed alpha
Helix 2	AA2	A	66	80	Right-handed alpha
Helix 3	AA3	A	84	100	Right-handed alpha
Helix 4	AA4	A	198	217	Right-handed alpha
Helix 5	AA5	A	221	237	Right-handed alpha
Helix 6	AA6	A	257	261	Right-handed 310
Helix 7	AA7	A	292	298	Right-handed 310
Helix 8	AA8	B	52	59	Right-handed alpha
Helix 9	AA9	B	66	79	Right-handed alpha
Helix 10	AB1	B	84	100	Right-handed alpha
Helix 11	AB2	B	198	217	Right-handed alpha
Helix 12	AB3	B	221	237	Right-handed alpha
Helix 13	AB4	B	257	261	Right-handed 310
Helix 14	AB5	B	292	298	Right-handed 310
Helix 15	AB6	C	52	59	Right-handed alpha
Helix 16	AB7	C	66	80	Right-handed alpha
Helix 17	AB8	C	84	100	Right-handed alpha
Helix 18	AB9	C	198	217	Right-handed alpha
Helix 19	AC1	C	221	237	Right-handed alpha
Helix 20	AC2	C	257	261	Right-handed 310
Helix 21	AC3	C	292	298	Right-handed 310
Helix 22	AC4	D	52	59	Right-handed alpha
Helix 23	AC5	D	66	79	Right-handed alpha
Helix 24	AC6	D	84	100	Right-handed alpha
Helix 25	AC7	D	198	217	Right-handed alpha
Helix 26	AC8	D	221	237	Right-handed alpha
Helix 27	AC9	D	257	261	Right-handed 310
Helix 28	AD1	D	292	298	Right-handed 310

There are 7 sheets in PDB entry 6OE8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	276	285	first strand
Strand 2	A	240	249	anti-parallel
Strand 3	A	182	192	anti-parallel
Strand 4	A	143	157	anti-parallel
Strand 5	A	124	140	anti-parallel
Strand 6	A	103	117	anti-parallel
Strand 7	A	38	50	anti-parallel
Strand 8	A	13	31	anti-parallel
Strand 9	B	268	271	anti-parallel
Strand 10	B	252	254	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	276	285	first strand
Strand 2	D	13	31	anti-parallel
Strand 3	C	268	271	anti-parallel
Strand 4	C	252	254	anti-parallel

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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	13	31	first strand
Strand 2	D	38	50	anti-parallel
Strand 3	D	103	117	anti-parallel
Strand 4	D	124	140	anti-parallel
Strand 5	D	143	157	anti-parallel
Strand 6	D	182	192	anti-parallel
Strand 7	D	240	249	anti-parallel
Strand 8	D	276	285	anti-parallel
Strand 9	A	13	31	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	143	157	first strand
Strand 2	B	124	140	anti-parallel
Strand 3	B	103	117	anti-parallel
Strand 4	B	38	50	anti-parallel
Strand 5	B	13	31	anti-parallel
Strand 6	A	268	271	anti-parallel
Strand 7	A	252	254	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	13	31	first strand
Strand 2	C	276	285	anti-parallel
Strand 3	C	240	249	anti-parallel
Strand 4	C	182	192	anti-parallel
Strand 5	C	143	157	anti-parallel
Strand 6	D	124	140	anti-parallel

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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	143	157	first strand
Strand 2	C	124	140	anti-parallel
Strand 3	D	143	157	anti-parallel
Strand 4	C	124	140	anti-parallel
Strand 5	C	103	117	anti-parallel
Strand 6	C	38	50	anti-parallel
Strand 7	C	13	31	anti-parallel
Strand 8	D	268	271	anti-parallel
Strand 9	D	252	254	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	31	first strand
Strand 2	B	276	285	anti-parallel
Strand 3	B	240	249	anti-parallel
Strand 4	B	182	192	anti-parallel
Strand 5	B	143	157	anti-parallel
Strand 6	A	124	140	anti-parallel
Strand 7	B	143	157	anti-parallel
Strand 8	B	124	140	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6OE8

Analysis of interatomic Contacts of Structural Units in PDB entry:
6OE8