Analysis of interatomic Contacts of Structural Units in PDB entry:
6OE9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OE9 entry

There is 1 chain in PDB entry 6OE9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 214LYS 414
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 6OE9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
270 274Right-handed 310
Helix 2
AA2
A
307 311Right-handed 310
Helix 3
AA3
A
315 324Right-handed alpha
Helix 4
AA4
A
327 332Right-handed alpha
Helix 5
AA5
A
372 376Right-handed 310
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There are 3 sheets in PDB entry 6OE9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
222 225first strand
Strand 2
A
288 291anti-parallel
Strand 3
A
294 297anti-parallel
Strand 4
A
263 268parallel
Strand 5
A
249 258anti-parallel
Strand 6
A
240 243anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
222 225first strand
Strand 2
A
288 291anti-parallel
Strand 3
A
294 297anti-parallel
Strand 4
A
263 268parallel
Strand 5
A
249 258anti-parallel
Strand 6
A
229 236anti-parallel
Strand 7
A
282 286anti-parallel
Strand 8
A
302 305anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
409 413first strand
Strand 2
A
385 396anti-parallel
Strand 3
A
399 403anti-parallel
Strand 4
A
365 371parallel
Strand 5
A
356 362anti-parallel
Strand 6
A
339 351anti-parallel
Strand 7
A
385 396anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il