Analysis of interatomic Contacts of Structural Units in PDB entry:
6OEG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6OEG entry

There are 14 chains in PDB entry 6OEG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
N	ALA 349	GLU 510
O	ALA 349	GLU 510
P	ALA 349	GLU 510
Q	ALA 349	GLU 510
R	ALA 349	GLU 510
S	ALA 349	GLU 510
T	ALA 349	GLU 510
U	ALA 349	GLU 510
V	ALA 349	GLU 510
W	ALA 349	GLU 510
X	ALA 349	GLU 510
Y	ALA 349	GLU 510
Z	ALA 349	GLU 510
a	ALA 349	GLU 510

There are 42 helices in PDB entry 6OEG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	N	351	356	Right-handed alpha
Helix 2	AA2	N	359	391	Right-handed alpha
Helix 3	AA3	N	460	464	Right-handed 310
Helix 4	AA4	O	351	356	Right-handed alpha
Helix 5	AA5	O	359	391	Right-handed alpha
Helix 6	AA6	O	460	464	Right-handed 310
Helix 7	AA7	P	351	356	Right-handed alpha
Helix 8	AA8	P	359	391	Right-handed alpha
Helix 9	AA9	P	460	464	Right-handed 310
Helix 10	AB1	Q	351	356	Right-handed alpha
Helix 11	AB2	Q	359	391	Right-handed alpha
Helix 12	AB3	Q	460	464	Right-handed 310
Helix 13	AB4	R	351	356	Right-handed alpha
Helix 14	AB5	R	359	391	Right-handed alpha
Helix 15	AB6	R	460	464	Right-handed 310
Helix 16	AB7	S	351	356	Right-handed alpha
Helix 17	AB8	S	359	391	Right-handed alpha
Helix 18	AB9	S	460	464	Right-handed 310
Helix 19	AC1	T	351	356	Right-handed alpha
Helix 20	AC2	T	359	391	Right-handed alpha
Helix 21	AC3	T	460	464	Right-handed 310
Helix 22	AC4	U	351	356	Right-handed alpha
Helix 23	AC5	U	359	391	Right-handed alpha
Helix 24	AC6	U	460	464	Right-handed 310
Helix 25	AC7	V	351	356	Right-handed alpha
Helix 26	AC8	V	359	391	Right-handed alpha
Helix 27	AC9	V	460	464	Right-handed 310
Helix 28	AD1	W	351	356	Right-handed alpha
Helix 29	AD2	W	359	391	Right-handed alpha
Helix 30	AD3	W	460	464	Right-handed 310
Helix 31	AD4	X	351	356	Right-handed alpha
Helix 32	AD5	X	359	391	Right-handed alpha
Helix 33	AD6	X	460	464	Right-handed 310
Helix 34	AD7	Y	351	356	Right-handed alpha
Helix 35	AD8	Y	359	391	Right-handed alpha
Helix 36	AD9	Y	460	464	Right-handed 310
Helix 37	AE1	Z	351	356	Right-handed alpha
Helix 38	AE2	Z	359	391	Right-handed alpha
Helix 39	AE3	Z	460	464	Right-handed 310
Helix 40	AE4	a	351	356	Right-handed alpha
Helix 41	AE5	a	359	391	Right-handed alpha
Helix 42	AE6	a	460	464	Right-handed 310

There are 28 sheets in PDB entry 6OEG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	403	407	first strand
Strand 2	N	484	489	anti-parallel
Strand 3	N	475	479	anti-parallel
Strand 4	N	438	442	anti-parallel
Strand 5	N	448	449	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	420	421	first strand
Strand 2	N	426	430	anti-parallel
Strand 3	N	465	469	anti-parallel
Strand 4	N	453	455	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	403	407	first strand
Strand 2	O	484	489	anti-parallel
Strand 3	O	475	479	anti-parallel
Strand 4	O	438	442	anti-parallel
Strand 5	O	448	449	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	420	421	first strand
Strand 2	O	426	430	anti-parallel
Strand 3	O	465	469	anti-parallel
Strand 4	O	453	455	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	403	407	first strand
Strand 2	P	484	489	anti-parallel
Strand 3	P	475	479	anti-parallel
Strand 4	P	438	442	anti-parallel
Strand 5	P	448	449	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	420	421	first strand
Strand 2	P	426	430	anti-parallel
Strand 3	P	465	469	anti-parallel
Strand 4	P	453	455	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	403	407	first strand
Strand 2	Q	484	489	anti-parallel
Strand 3	Q	475	479	anti-parallel
Strand 4	Q	438	442	anti-parallel
Strand 5	Q	448	449	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	420	421	first strand
Strand 2	Q	426	430	anti-parallel
Strand 3	Q	465	469	anti-parallel
Strand 4	Q	453	455	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	403	407	first strand
Strand 2	R	484	489	anti-parallel
Strand 3	R	475	479	anti-parallel
Strand 4	R	438	442	anti-parallel
Strand 5	R	448	449	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	420	421	first strand
Strand 2	R	426	430	anti-parallel
Strand 3	R	465	469	anti-parallel
Strand 4	R	453	455	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	403	407	first strand
Strand 2	S	484	489	anti-parallel
Strand 3	S	475	479	anti-parallel
Strand 4	S	438	442	anti-parallel
Strand 5	S	448	449	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	420	421	first strand
Strand 2	S	426	430	anti-parallel
Strand 3	S	465	469	anti-parallel
Strand 4	S	453	455	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	403	407	first strand
Strand 2	T	484	489	anti-parallel
Strand 3	T	475	479	anti-parallel
Strand 4	T	438	442	anti-parallel
Strand 5	T	448	449	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	420	421	first strand
Strand 2	T	426	430	anti-parallel
Strand 3	T	465	469	anti-parallel
Strand 4	T	453	455	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	403	407	first strand
Strand 2	U	484	489	anti-parallel
Strand 3	U	475	479	anti-parallel
Strand 4	U	438	442	anti-parallel
Strand 5	U	448	449	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	420	421	first strand
Strand 2	U	426	430	anti-parallel
Strand 3	U	465	469	anti-parallel
Strand 4	U	453	455	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	403	407	first strand
Strand 2	V	484	489	anti-parallel
Strand 3	V	475	479	anti-parallel
Strand 4	V	438	442	anti-parallel
Strand 5	V	448	449	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	420	421	first strand
Strand 2	V	426	430	anti-parallel
Strand 3	V	465	469	anti-parallel
Strand 4	V	453	455	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	403	407	first strand
Strand 2	W	484	489	anti-parallel
Strand 3	W	475	479	anti-parallel
Strand 4	W	438	442	anti-parallel
Strand 5	W	448	449	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	420	421	first strand
Strand 2	W	426	430	anti-parallel
Strand 3	W	465	469	anti-parallel
Strand 4	W	453	455	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	403	407	first strand
Strand 2	X	484	489	anti-parallel
Strand 3	X	475	479	anti-parallel
Strand 4	X	438	442	anti-parallel
Strand 5	X	448	449	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	420	421	first strand
Strand 2	X	426	430	anti-parallel
Strand 3	X	465	469	anti-parallel
Strand 4	X	453	455	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	403	407	first strand
Strand 2	Y	484	489	anti-parallel
Strand 3	Y	475	479	anti-parallel
Strand 4	Y	438	442	anti-parallel
Strand 5	Y	448	449	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	420	421	first strand
Strand 2	Y	426	430	anti-parallel
Strand 3	Y	465	469	anti-parallel
Strand 4	Y	453	455	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	403	407	first strand
Strand 2	Z	484	489	anti-parallel
Strand 3	Z	475	479	anti-parallel
Strand 4	Z	438	442	anti-parallel
Strand 5	Z	448	449	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	420	421	first strand
Strand 2	Z	426	430	anti-parallel
Strand 3	Z	465	469	anti-parallel
Strand 4	Z	453	455	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	403	407	first strand
Strand 2	a	484	489	anti-parallel
Strand 3	a	475	479	anti-parallel
Strand 4	a	438	442	anti-parallel
Strand 5	a	448	449	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	420	421	first strand
Strand 2	a	426	430	anti-parallel
Strand 3	a	465	469	anti-parallel
Strand 4	a	453	455	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6OEG

Analysis of interatomic Contacts of Structural Units in PDB entry:
6OEG