Analysis of interatomic Contacts of Structural Units in PDB entry:
6OEL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OEL entry

There are 5 chains in PDB entry 6OEL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 3ALA 129
B
 PHE 1SER 199
C
 GLN 39ASN 227
H
 GLN 1ARG 229
L
 ASP 1GLU 233
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6OEL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 18Right-handed alpha
Helix 2
AA2
A
23 26Right-handed 310
Helix 3
AA3
A
40 60Right-handed alpha
Helix 4
AA4
A
69 95Right-handed alpha
Helix 5
AA5
A
109 127Right-handed alpha
Helix 6
AA6
B
28 32Right-handed alpha
Helix 7
AA7
B
91 95Right-handed 310
Helix 8
AA8
B
128 130Right-handed 310
Helix 9
AA9
B
164 166Right-handed 310
Helix 10
AB1
B
182 184Right-handed 310
Helix 11
AB2
H
95 99Right-handed 310
Helix 12
AB3
H
171 173Right-handed 310
Helix 13
AB4
H
202 204Right-handed 310
Helix 14
AB5
H
216 219Right-handed 310
Helix 15
AB6
L
95 99Right-handed 310
Helix 16
AB7
L
141 146Right-handed alpha
Helix 17
AB8
L
203 208Right-handed alpha
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There are 19 sheets in PDB entry 6OEL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 30first strand
Strand 2
A
106 108anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
8 11first strand
Strand 2
B
16 22anti-parallel
Strand 3
B
58 64anti-parallel
Strand 4
B
52 53anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 49first strand
Strand 2
B
33 39anti-parallel
Strand 3
B
74 80anti-parallel
Strand 4
B
83 90anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 107first strand
Strand 2
B
113 119anti-parallel
Strand 3
B
158 162anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 152first strand
Strand 2
B
132 140anti-parallel
Strand 3
B
171 180anti-parallel
Strand 4
B
194 197anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
42 43first strand
Strand 2
C
47 51anti-parallel
Strand 3
C
92 95anti-parallel
Strand 4
C
82 84anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
68 69first strand
Strand 2
C
106 107anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
136 141first strand
Strand 2
C
149 153anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
176 180first strand
Strand 2
C
161 169anti-parallel
Strand 3
C
197 205anti-parallel
Strand 4
C
222 224anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 6first strand
Strand 2
H
18 26anti-parallel
Strand 3
H
86 92anti-parallel
Strand 4
H
76 81anti-parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
11 13first strand
Strand 2
H
122 126parallel
Strand 3
H
100 108anti-parallel
Strand 4
H
37 45anti-parallel
Strand 5
H
49 58anti-parallel
Strand 6
H
63 67anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
11 13first strand
Strand 2
H
122 126parallel
Strand 3
H
100 108anti-parallel
Strand 4
H
114 118anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
135 139first strand
Strand 2
H
150 160anti-parallel
Strand 3
H
191 200anti-parallel
Strand 4
H
178 180anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
135 139first strand
Strand 2
H
150 160anti-parallel
Strand 3
H
191 200anti-parallel
Strand 4
H
184 185anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
166 169first strand
Strand 2
H
210 215anti-parallel
Strand 3
H
220 225anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
4 7first strand
Strand 2
L
19 25anti-parallel
Strand 3
L
86 91anti-parallel
Strand 4
L
76 80anti-parallel
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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
10 14first strand
Strand 2
L
123 127parallel
Strand 3
L
100 106anti-parallel
Strand 4
L
39 44anti-parallel
Strand 5
L
51 55anti-parallel
Strand 6
L
66 67anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
134 138first strand
Strand 2
L
149 159anti-parallel
Strand 3
L
193 202anti-parallel
Strand 4
L
179 183anti-parallel
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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
165 170first strand
Strand 2
L
211 217anti-parallel
Strand 3
L
225 230anti-parallel
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