Analysis of interatomic Contacts of Structural Units in PDB entry:
6OEN

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6OEN entry

There are 10 chains in PDB entry 6OEN (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 400	ALA 1008
C	HIS 395	ALA 1008
B	MET 1	SER 351
D	MET 1	SER 351
G	C 1	C 57
I	G 1	G 46
F	C 1	C 46
J	G 1	G 57
N	PRO 99	THR 136
H	ALA 101	TYR 155

There are 61 helices in PDB entry 6OEN. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	400	408	Right-handed alpha
Helix 2	AA2	A	408	423	Right-handed alpha
Helix 3	AA3	A	426	442	Right-handed alpha
Helix 4	AA4	A	444	457	Right-handed alpha
Helix 5	AA5	A	463	475	Right-handed alpha
Helix 6	AA6	A	477	493	Right-handed alpha
Helix 7	AA7	A	499	511	Right-handed alpha
Helix 8	AA8	A	558	570	Right-handed alpha
Helix 9	AA9	A	570	581	Right-handed alpha
Helix 10	AB1	A	664	683	Right-handed alpha
Helix 11	AB2	A	708	716	Right-handed alpha
Helix 12	AB3	A	733	740	Right-handed alpha
Helix 13	AB4	A	749	763	Right-handed alpha
Helix 14	AB5	A	768	777	Right-handed alpha
Helix 15	AB6	A	792	812	Right-handed alpha
Helix 16	AB7	A	822	841	Right-handed alpha
Helix 17	AB8	A	850	858	Right-handed alpha
Helix 18	AB9	A	859	868	Right-handed alpha
Helix 19	AC1	A	874	894	Right-handed alpha
Helix 20	AC2	A	902	907	Right-handed alpha
Helix 21	AC3	A	908	923	Right-handed alpha
Helix 22	AC4	A	933	942	Right-handed alpha
Helix 23	AC5	A	942	951	Right-handed alpha
Helix 24	AC6	A	962	975	Right-handed alpha
Helix 25	AC7	A	981	995	Right-handed alpha
Helix 26	AC8	A	996	1004	Right-handed alpha
Helix 27	AC9	C	400	423	Right-handed alpha
Helix 28	AD1	C	426	441	Right-handed alpha
Helix 29	AD2	C	444	457	Right-handed alpha
Helix 30	AD3	C	463	475	Right-handed alpha
Helix 31	AD4	C	477	493	Right-handed alpha
Helix 32	AD5	C	499	509	Right-handed alpha
Helix 33	AD6	C	558	570	Right-handed alpha
Helix 34	AD7	C	570	581	Right-handed alpha
Helix 35	AD8	C	664	683	Right-handed alpha
Helix 36	AD9	C	708	716	Right-handed alpha
Helix 37	AE1	C	733	740	Right-handed alpha
Helix 38	AE2	C	749	763	Right-handed alpha
Helix 39	AE3	C	768	776	Right-handed alpha
Helix 40	AE4	C	792	814	Right-handed alpha
Helix 41	AE5	C	822	841	Right-handed alpha
Helix 42	AE6	C	850	858	Right-handed alpha
Helix 43	AE7	C	859	868	Right-handed alpha
Helix 44	AE8	C	873	894	Right-handed alpha
Helix 45	AE9	C	902	907	Right-handed alpha
Helix 46	AF1	C	908	923	Right-handed alpha
Helix 47	AF2	C	933	941	Right-handed alpha
Helix 48	AF3	C	943	950	Right-handed alpha
Helix 49	AF4	C	963	975	Right-handed alpha
Helix 50	AF5	C	981	995	Right-handed alpha
Helix 51	AF6	C	996	1004	Right-handed alpha
Helix 52	AF7	C	1005	1008	Right-handed 310
Helix 53	AF8	B	11	15	Right-handed 310
Helix 54	AF9	B	308	313	Right-handed alpha
Helix 55	AG1	D	11	15	Right-handed 310
Helix 56	AG2	D	308	313	Right-handed alpha
Helix 57	AG3	N	100	117	Right-handed alpha
Helix 58	AG4	N	123	136	Right-handed alpha
Helix 59	AG5	H	102	117	Right-handed alpha
Helix 60	AG6	H	121	136	Right-handed alpha
Helix 61	AG7	H	141	155	Right-handed alpha

There are 20 sheets in PDB entry 6OEN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	518	519	first strand
Strand 2	A	687	690	anti-parallel
Strand 3	A	695	706	anti-parallel
Strand 4	A	591	604	parallel
Strand 5	A	618	632	anti-parallel
Strand 6	A	653	658	anti-parallel
Strand 7	A	554	556	anti-parallel
Strand 8	A	535	536	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	518	519	first strand
Strand 2	A	687	690	anti-parallel
Strand 3	A	695	706	anti-parallel
Strand 4	A	591	604	parallel
Strand 5	A	618	632	anti-parallel
Strand 6	A	637	642	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	518	519	first strand
Strand 2	C	687	689	anti-parallel
Strand 3	C	696	706	anti-parallel
Strand 4	C	591	604	parallel
Strand 5	C	618	633	anti-parallel
Strand 6	C	653	658	anti-parallel
Strand 7	C	554	557	anti-parallel
Strand 8	C	534	536	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	518	519	first strand
Strand 2	C	687	689	anti-parallel
Strand 3	C	696	706	anti-parallel
Strand 4	C	591	604	parallel
Strand 5	C	618	633	anti-parallel
Strand 6	C	636	642	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2	5	first strand
Strand 2	B	343	349	anti-parallel
Strand 3	B	326	332	anti-parallel
Strand 4	B	320	321	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	20	24	first strand
Strand 2	B	27	31	anti-parallel
Strand 3	B	46	50	anti-parallel
Strand 4	B	55	59	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	61	62	first strand
Strand 2	B	119	122	parallel
Strand 3	B	112	116	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	75	80	first strand
Strand 2	B	90	95	anti-parallel
Strand 3	B	107	110	anti-parallel
Strand 4	B	125	127	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	130	131	first strand
Strand 2	B	191	196	parallel
Strand 3	B	181	185	anti-parallel
Strand 4	B	150	156	anti-parallel
Strand 5	B	141	147	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	159	161	first strand
Strand 2	B	175	177	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	208	212	first strand
Strand 2	B	215	219	anti-parallel
Strand 3	B	234	239	anti-parallel
Strand 4	B	246	250	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	263	267	first strand
Strand 2	B	270	273	anti-parallel
Strand 3	B	288	292	anti-parallel
Strand 4	B	297	301	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2	5	first strand
Strand 2	D	343	349	anti-parallel
Strand 3	D	326	332	anti-parallel
Strand 4	D	320	321	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	20	24	first strand
Strand 2	D	27	31	anti-parallel
Strand 3	D	46	50	anti-parallel
Strand 4	D	55	59	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	61	62	first strand
Strand 2	D	119	122	parallel
Strand 3	D	112	116	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	75	80	first strand
Strand 2	D	90	95	anti-parallel
Strand 3	D	107	110	anti-parallel
Strand 4	D	125	127	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	130	131	first strand
Strand 2	D	191	196	parallel
Strand 3	D	181	185	anti-parallel
Strand 4	D	150	156	anti-parallel
Strand 5	D	141	147	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	159	161	first strand
Strand 2	D	175	177	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	208	212	first strand
Strand 2	D	215	219	anti-parallel
Strand 3	D	234	239	anti-parallel
Strand 4	D	246	250	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	263	267	first strand
Strand 2	D	270	273	anti-parallel
Strand 3	D	288	292	anti-parallel
Strand 4	D	297	301	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6OEN

Analysis of interatomic Contacts of Structural Units in PDB entry:
6OEN