Analysis of interatomic Contacts of Structural Units in PDB entry:
6OEW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OEW entry

There are 2 chains in PDB entry 6OEW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0HIS 237
B
 HIS 0LYS 238
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6OEW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 21Right-handed 310
Helix 2
AA2
A
29 38Right-handed alpha
Helix 3
AA3
A
42 44Right-handed 310
Helix 4
AA4
A
53 55Right-handed 310
Helix 5
AA5
A
56 66Right-handed alpha
Helix 6
AA6
A
77 89Right-handed alpha
Helix 7
AA7
A
105 119Right-handed alpha
Helix 8
AA8
A
145 155Right-handed alpha
Helix 9
AA9
A
157 164Right-handed alpha
Helix 10
AB1
A
165 171Right-handed alpha
Helix 11
AB2
A
172 175Right-handed 310
Helix 12
AB3
A
195 207Right-handed alpha
Helix 13
AB4
A
215 226Right-handed alpha
Helix 14
AB5
A
227 230Right-handed 310
Helix 15
AB6
B
18 21Right-handed 310
Helix 16
AB7
B
29 39Right-handed alpha
Helix 17
AB8
B
42 44Right-handed 310
Helix 18
AB9
B
53 55Right-handed 310
Helix 19
AC1
B
56 66Right-handed alpha
Helix 20
AC2
B
77 89Right-handed alpha
Helix 21
AC3
B
105 119Right-handed alpha
Helix 22
AC4
B
145 155Right-handed alpha
Helix 23
AC5
B
157 164Right-handed alpha
Helix 24
AC6
B
165 171Right-handed alpha
Helix 25
AC7
B
172 175Right-handed 310
Helix 26
AC8
B
195 207Right-handed alpha
Helix 27
AC9
B
215 226Right-handed alpha
Helix 28
AD1
B
227 230Right-handed 310
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There are 4 sheets in PDB entry 6OEW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 179first strand
Strand 2
A
125 127parallel
Strand 3
A
141 144anti-parallel
Strand 4
A
93 98anti-parallel
Strand 5
A
3 8parallel
Strand 6
A
46 51parallel
Strand 7
A
69 73parallel
Strand 8
B
234 236parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 24first strand
Strand 2
A
27 28anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 73first strand
Strand 2
B
46 51parallel
Strand 3
B
3 8parallel
Strand 4
B
93 98parallel
Strand 5
B
141 144anti-parallel
Strand 6
B
125 127anti-parallel
Strand 7
B
177 179parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 24first strand
Strand 2
B
27 28anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il