Analysis of interatomic Contacts of Structural Units in PDB entry:
6OFC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6OFC entry

There are 4 chains in PDB entry 6OFC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLY 679
B	MET 1	GLY 679
C	MET 1	GLY 679
D	MET 1	GLY 679

There are109 helices in PDB entry 6OFC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	5	9	Right-handed 310
Helix 2	AA2	A	25	43	Right-handed alpha
Helix 3	AA3	A	60	65	Right-handed 310
Helix 4	AA4	A	66	84	Right-handed alpha
Helix 5	AA5	A	85	87	Right-handed 310
Helix 6	AA6	A	132	136	Right-handed alpha
Helix 7	AA7	A	177	181	Right-handed 310
Helix 8	AA8	A	184	192	Right-handed alpha
Helix 9	AA9	A	208	224	Right-handed alpha
Helix 10	AB1	A	276	286	Right-handed alpha
Helix 11	AB2	A	286	296	Right-handed alpha
Helix 12	AB3	A	296	302	Right-handed alpha
Helix 13	AB4	A	332	358	Right-handed alpha
Helix 14	AB5	A	370	387	Right-handed alpha
Helix 15	AB6	A	390	392	Right-handed 310
Helix 16	AB7	A	406	420	Right-handed alpha
Helix 17	AB8	A	428	440	Right-handed alpha
Helix 18	AB9	A	453	474	Right-handed alpha
Helix 19	AC1	A	482	489	Right-handed alpha
Helix 20	AC2	A	509	524	Right-handed alpha
Helix 21	AC3	A	527	543	Right-handed alpha
Helix 22	AC4	A	554	562	Right-handed alpha
Helix 23	AC5	A	563	578	Right-handed alpha
Helix 24	AC6	A	580	593	Right-handed alpha
Helix 25	AC7	A	613	630	Right-handed alpha
Helix 26	AC8	A	632	638	Right-handed alpha
Helix 27	AC9	A	665	676	Right-handed alpha
Helix 28	AD1	B	6	9	Right-handed 310
Helix 29	AD2	B	25	44	Right-handed alpha
Helix 30	AD3	B	60	65	Right-handed 310
Helix 31	AD4	B	66	84	Right-handed alpha
Helix 32	AD5	B	85	87	Right-handed 310
Helix 33	AD6	B	132	136	Right-handed alpha
Helix 34	AD7	B	177	181	Right-handed 310
Helix 35	AD8	B	184	192	Right-handed alpha
Helix 36	AD9	B	208	224	Right-handed alpha
Helix 37	AE1	B	276	286	Right-handed alpha
Helix 38	AE2	B	286	296	Right-handed alpha
Helix 39	AE3	B	296	302	Right-handed alpha
Helix 40	AE4	B	332	358	Right-handed alpha
Helix 41	AE5	B	370	387	Right-handed alpha
Helix 42	AE6	B	390	392	Right-handed 310
Helix 43	AE7	B	406	420	Right-handed alpha
Helix 44	AE8	B	428	439	Right-handed alpha
Helix 45	AE9	B	453	474	Right-handed alpha
Helix 46	AF1	B	482	489	Right-handed alpha
Helix 47	AF2	B	509	524	Right-handed alpha
Helix 48	AF3	B	527	543	Right-handed alpha
Helix 49	AF4	B	553	562	Right-handed alpha
Helix 50	AF5	B	563	578	Right-handed alpha
Helix 51	AF6	B	580	593	Right-handed alpha
Helix 52	AF7	B	613	630	Right-handed alpha
Helix 53	AF8	B	632	638	Right-handed alpha
Helix 54	AF9	B	665	676	Right-handed alpha
Helix 55	AG1	C	6	9	Right-handed 310
Helix 56	AG2	C	25	43	Right-handed alpha
Helix 57	AG3	C	60	65	Right-handed 310
Helix 58	AG4	C	66	84	Right-handed alpha
Helix 59	AG5	C	85	87	Right-handed 310
Helix 60	AG6	C	132	136	Right-handed alpha
Helix 61	AG7	C	177	181	Right-handed 310
Helix 62	AG8	C	184	192	Right-handed alpha
Helix 63	AG9	C	208	224	Right-handed alpha
Helix 64	AH1	C	276	286	Right-handed alpha
Helix 65	AH2	C	286	296	Right-handed alpha
Helix 66	AH3	C	296	302	Right-handed alpha
Helix 67	AH4	C	332	358	Right-handed alpha
Helix 68	AH5	C	370	387	Right-handed alpha
Helix 69	AH6	C	390	392	Right-handed 310
Helix 70	AH7	C	408	420	Right-handed alpha
Helix 71	AH8	C	428	439	Right-handed alpha
Helix 72	AH9	C	441	446	Right-handed 310
Helix 73	AI1	C	451	474	Right-handed alpha
Helix 74	AI2	C	482	489	Right-handed alpha
Helix 75	AI3	C	509	524	Right-handed alpha
Helix 76	AI4	C	527	542	Right-handed alpha
Helix 77	AI5	C	556	560	Right-handed 310
Helix 78	AI6	C	563	578	Right-handed alpha
Helix 79	AI7	C	580	593	Right-handed alpha
Helix 80	AI8	C	613	630	Right-handed alpha
Helix 81	AI9	C	632	638	Right-handed alpha
Helix 82	AJ1	C	665	676	Right-handed alpha
Helix 83	AJ2	D	6	9	Right-handed 310
Helix 84	AJ3	D	25	43	Right-handed alpha
Helix 85	AJ4	D	60	65	Right-handed 310
Helix 86	AJ5	D	66	84	Right-handed alpha
Helix 87	AJ6	D	85	87	Right-handed 310
Helix 88	AJ7	D	131	136	Right-handed alpha
Helix 89	AJ8	D	177	181	Right-handed 310
Helix 90	AJ9	D	184	192	Right-handed alpha
Helix 91	AK1	D	208	224	Right-handed alpha
Helix 92	AK2	D	276	286	Right-handed alpha
Helix 93	AK3	D	286	296	Right-handed alpha
Helix 94	AK4	D	296	302	Right-handed alpha
Helix 95	AK5	D	332	358	Right-handed alpha
Helix 96	AK6	D	370	387	Right-handed alpha
Helix 97	AK7	D	390	392	Right-handed 310
Helix 98	AK8	D	408	420	Right-handed alpha
Helix 99	AK9	D	428	439	Right-handed alpha
Helix 100	AL1	D	441	446	Right-handed 310
Helix 101	AL2	D	451	474	Right-handed alpha
Helix 102	AL3	D	482	489	Right-handed alpha
Helix 103	AL4	D	509	524	Right-handed alpha
Helix 104	AL5	D	527	542	Right-handed alpha
Helix 105	AL6	D	563	578	Right-handed alpha
Helix 106	AL7	D	580	593	Right-handed alpha
Helix 107	AL8	D	613	630	Right-handed alpha
Helix 108	AL9	D	632	638	Right-handed alpha
Helix 109	AM1	D	665	676	Right-handed alpha

There are 15 sheets in PDB entry 6OFC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	145	147	first strand
Strand 2	A	152	155	anti-parallel
Strand 3	A	114	120	parallel
Strand 4	A	102	111	anti-parallel
Strand 5	A	90	99	anti-parallel
Strand 6	A	47	49	parallel
Strand 7	A	11	18	parallel
Strand 8	A	268	275	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	127	first strand
Strand 2	A	130	131	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	255	259	first strand
Strand 2	A	248	252	anti-parallel
Strand 3	A	227	231	anti-parallel
Strand 4	A	196	200	parallel
Strand 5	A	170	175	parallel
Strand 6	A	159	163	anti-parallel
Strand 7	A	304	308	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	422	425	first strand
Strand 2	A	394	398	parallel
Strand 3	A	362	366	parallel
Strand 4	A	475	479	parallel
Strand 5	A	502	503	parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	145	147	first strand
Strand 2	B	152	155	anti-parallel
Strand 3	B	114	120	parallel
Strand 4	B	102	111	anti-parallel
Strand 5	B	90	99	anti-parallel
Strand 6	B	47	49	parallel
Strand 7	B	11	18	parallel
Strand 8	B	268	275	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	126	127	first strand
Strand 2	B	130	131	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	255	259	first strand
Strand 2	B	248	252	anti-parallel
Strand 3	B	227	232	anti-parallel
Strand 4	B	196	201	parallel
Strand 5	B	170	175	parallel
Strand 6	B	159	163	anti-parallel
Strand 7	B	304	308	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	422	425	first strand
Strand 2	B	394	398	parallel
Strand 3	B	362	366	parallel
Strand 4	B	475	479	parallel
Strand 5	B	502	503	parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	145	147	first strand
Strand 2	C	152	155	anti-parallel
Strand 3	C	114	120	parallel
Strand 4	C	102	111	anti-parallel
Strand 5	C	90	99	anti-parallel
Strand 6	C	47	49	parallel
Strand 7	C	11	18	parallel
Strand 8	C	268	275	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	126	127	first strand
Strand 2	C	130	131	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	255	259	first strand
Strand 2	C	248	252	anti-parallel
Strand 3	C	227	231	anti-parallel
Strand 4	C	196	200	parallel
Strand 5	C	170	175	parallel
Strand 6	C	159	163	anti-parallel
Strand 7	C	304	308	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	422	425	first strand
Strand 2	C	394	398	parallel
Strand 3	C	362	366	parallel
Strand 4	C	475	479	parallel
Strand 5	C	502	503	parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	145	147	first strand
Strand 2	D	152	155	anti-parallel
Strand 3	D	114	120	parallel
Strand 4	D	102	111	anti-parallel
Strand 5	D	90	99	anti-parallel
Strand 6	D	47	49	parallel
Strand 7	D	11	18	parallel
Strand 8	D	268	275	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	255	259	first strand
Strand 2	D	248	252	anti-parallel
Strand 3	D	227	231	anti-parallel
Strand 4	D	196	200	parallel
Strand 5	D	170	175	parallel
Strand 6	D	159	163	anti-parallel
Strand 7	D	304	308	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	422	425	first strand
Strand 2	D	394	398	parallel
Strand 3	D	362	366	parallel
Strand 4	D	475	479	parallel
Strand 5	D	502	503	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6OFC

Analysis of interatomic Contacts of Structural Units in PDB entry:
6OFC