Analysis of interatomic Contacts of Structural Units in PDB entry:
6OFO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OFO entry

There are 4 chains in PDB entry 6OFO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 4LEU 126
A
 VAL 130GLY 251
B
 MET 4LEU 126
B
 VAL 130GLY 251
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6OFO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
66 71Right-handed 310
Helix 2
AA2
A
118 123Right-handed 310
Helix 3
AA3
A
130 134Right-handed 310
Helix 4
AA4
A
137 143Right-handed 310
Helix 5
AA5
A
144 149Right-handed alpha
Helix 6
AA6
A
218 221Right-handed 310
Helix 7
AA7
B
66 71Right-handed 310
Helix 8
AA8
B
118 123Right-handed 310
Helix 9
AA9
B
130 134Right-handed 310
Helix 10
AB1
B
137 143Right-handed 310
Helix 11
AB2
B
144 149Right-handed alpha
Helix 12
AB3
B
218 221Right-handed 310
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There are 2 sheets in PDB entry 6OFO. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 18first strand
Strand 2
A
36 46anti-parallel
Strand 3
A
103 110anti-parallel
Strand 4
A
87 98anti-parallel
Strand 5
A
73 84anti-parallel
Strand 6
A
180 190parallel
Strand 7
A
167 177anti-parallel
Strand 8
A
154 162anti-parallel
Strand 9
A
238 249anti-parallel
Strand 10
A
222 232anti-parallel
Strand 11
A
210 217anti-parallel
Strand 12
A
9 18anti-parallel
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There are 12 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 18first strand
Strand 2
B
36 46anti-parallel
Strand 3
B
103 110anti-parallel
Strand 4
B
87 98anti-parallel
Strand 5
B
74 84anti-parallel
Strand 6
B
180 190parallel
Strand 7
B
167 177anti-parallel
Strand 8
B
154 162anti-parallel
Strand 9
B
238 249anti-parallel
Strand 10
B
222 232anti-parallel
Strand 11
B
210 217anti-parallel
Strand 12
B
9 18anti-parallel
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