Analysis of interatomic Contacts of Structural Units in PDB entry:
6OFS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OFS entry

There is 1 chain in PDB entry 6OFS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 27LYS 931
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 6OFS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
77 86Right-handed alpha
Helix 2
AA2
A
96 105Right-handed alpha
Helix 3
AA3
A
132 149Right-handed alpha
Helix 4
AA4
A
153 171Right-handed alpha
Helix 5
AA5
A
173 187Right-handed alpha
Helix 6
AA6
A
191 195Right-handed 310
Helix 7
AA7
A
200 207Right-handed alpha
Helix 8
AA8
A
208 220Right-handed alpha
Helix 9
AA9
A
221 223Right-handed 310
Helix 10
AB1
A
234 247Right-handed alpha
Helix 11
AB2
A
296 323Right-handed alpha
Helix 12
AB3
A
356 375Right-handed alpha
Helix 13
AB4
A
377 398Right-handed alpha
Helix 14
AB5
A
399 402Right-handed 310
Helix 15
AB6
A
403 418Right-handed alpha
Helix 16
AB7
A
423 436Right-handed alpha
Helix 17
AB8
A
439 453Right-handed alpha
Helix 18
AB9
A
464 471Right-handed alpha
Helix 19
AC1
A
473 486Right-handed alpha
Helix 20
AC2
A
553 557Right-handed 310
Helix 21
AC3
A
561 563Right-handed 310
Helix 22
AC4
A
564 574Right-handed alpha
Helix 23
AC5
A
581 592Right-handed alpha
Helix 24
AC6
A
616 629Right-handed alpha
Helix 25
AC7
A
633 650Right-handed alpha
Helix 26
AC8
A
651 653Right-handed 310
Helix 27
AC9
A
654 668Right-handed alpha
Helix 28
AD1
A
670 674Right-handed 310
Helix 29
AD2
A
677 684Right-handed alpha
Helix 30
AD3
A
685 695Right-handed alpha
Helix 31
AD4
A
699 701Right-handed 310
Helix 32
AD5
A
712 724Right-handed alpha
Helix 33
AD6
A
774 797Right-handed alpha
Helix 34
AD7
A
828 830Right-handed 310
Helix 35
AD8
A
831 850Right-handed alpha
Helix 36
AD9
A
852 869Right-handed alpha
Helix 37
AE1
A
873 889Right-handed alpha
Helix 38
AE2
A
892 895Right-handed 310
Helix 39
AE3
A
896 902Right-handed alpha
Helix 40
AE4
A
905 917Right-handed alpha
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There are 4 sheets in PDB entry 6OFS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 39first strand
Strand 2
A
45 50anti-parallel
Strand 3
A
225 231parallel
Strand 4
A
57 64anti-parallel
Strand 5
A
122 129anti-parallel
Strand 6
A
113 117anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
268 274first strand
Strand 2
A
456 462parallel
Strand 3
A
282 290anti-parallel
Strand 4
A
343 352anti-parallel
Strand 5
A
329 340anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
511 518first strand
Strand 2
A
521 526anti-parallel
Strand 3
A
531 535anti-parallel
Strand 4
A
703 708parallel
Strand 5
A
543 550anti-parallel
Strand 6
A
605 612anti-parallel
Strand 7
A
595 600anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
747 754first strand
Strand 2
A
922 930parallel
Strand 3
A
759 768anti-parallel
Strand 4
A
818 827anti-parallel
Strand 5
A
805 813anti-parallel
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