Analysis of interatomic Contacts of Structural Units in PDB entry:
6OFU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OFU entry

There are 8 chains in PDB entry 6OFU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 233
A
 GLN 235GLU 278
B
 MET 1LEU 233
B
 GLN 235GLU 278
C
 MET 1LEU 233
C
 GLN 235GLU 278
D
 MET 1LEU 233
D
 GLN 235GLU 278
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 6OFU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 16Right-handed alpha
Helix 2
AA2
A
26 41Right-handed alpha
Helix 3
AA3
A
51 53Right-handed 310
Helix 4
AA4
A
57 72Right-handed alpha
Helix 5
AA5
A
85 95Right-handed alpha
Helix 6
AA6
A
108 124Right-handed alpha
Helix 7
AA7
A
125 127Right-handed 310
Helix 8
AA8
A
154 166Right-handed alpha
Helix 9
AA9
A
188 199Right-handed alpha
Helix 10
AB1
A
212 222Right-handed alpha
Helix 11
AB2
A
230 244Right-handed alpha
Helix 12
AB3
A
248 271Right-handed alpha
Helix 13
AB4
B
4 16Right-handed alpha
Helix 14
AB5
B
26 41Right-handed alpha
Helix 15
AB6
B
49 53Right-handed 310
Helix 16
AB7
B
57 72Right-handed alpha
Helix 17
AB8
B
85 95Right-handed alpha
Helix 18
AB9
B
108 124Right-handed alpha
Helix 19
AC1
B
125 127Right-handed 310
Helix 20
AC2
B
154 166Right-handed alpha
Helix 21
AC3
B
188 199Right-handed alpha
Helix 22
AC4
B
212 222Right-handed alpha
Helix 23
AC5
B
231 244Right-handed alpha
Helix 24
AC6
B
248 272Right-handed alpha
Helix 25
AC7
C
4 16Right-handed alpha
Helix 26
AC8
C
26 41Right-handed alpha
Helix 27
AC9
C
49 53Right-handed 310
Helix 28
AD1
C
57 72Right-handed alpha
Helix 29
AD2
C
85 95Right-handed alpha
Helix 30
AD3
C
108 124Right-handed alpha
Helix 31
AD4
C
125 127Right-handed 310
Helix 32
AD5
C
141 147Right-handed alpha
Helix 33
AD6
C
154 166Right-handed alpha
Helix 34
AD7
C
188 199Right-handed alpha
Helix 35
AD8
C
212 222Right-handed alpha
Helix 36
AD9
C
231 244Right-handed alpha
Helix 37
AE1
C
248 272Right-handed alpha
Helix 38
AE2
D
4 16Right-handed alpha
Helix 39
AE3
D
26 40Right-handed alpha
Helix 40
AE4
D
49 53Right-handed 310
Helix 41
AE5
D
57 72Right-handed alpha
Helix 42
AE6
D
85 95Right-handed alpha
Helix 43
AE7
D
108 124Right-handed alpha
Helix 44
AE8
D
125 127Right-handed 310
Helix 45
AE9
D
154 166Right-handed alpha
Helix 46
AF1
D
188 199Right-handed alpha
Helix 47
AF2
D
212 222Right-handed alpha
Helix 48
AF3
D
231 244Right-handed alpha
Helix 49
AF4
D
248 272Right-handed alpha
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There are 4 sheets in PDB entry 6OFU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 23first strand
Strand 2
A
44 49parallel
Strand 3
A
76 83parallel
Strand 4
A
99 102parallel
Strand 5
A
130 133parallel
Strand 6
A
169 172parallel
Strand 7
A
203 205parallel
Strand 8
A
224 229parallel
Strand 9
A
19 23parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 23first strand
Strand 2
B
44 48parallel
Strand 3
B
76 83parallel
Strand 4
B
99 102parallel
Strand 5
B
130 133parallel
Strand 6
B
169 171parallel
Strand 7
B
203 206parallel
Strand 8
B
224 229parallel
Strand 9
B
19 23parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
19 23first strand
Strand 2
C
44 48parallel
Strand 3
C
76 83parallel
Strand 4
C
99 102parallel
Strand 5
C
130 134parallel
Strand 6
C
169 172parallel
Strand 7
C
203 205parallel
Strand 8
C
224 228parallel
Strand 9
C
19 23parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
19 23first strand
Strand 2
D
44 48parallel
Strand 3
D
76 83parallel
Strand 4
D
99 102parallel
Strand 5
D
130 134parallel
Strand 6
D
169 172parallel
Strand 7
D
203 205parallel
Strand 8
D
224 229parallel
Strand 9
D
19 23parallel
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