Analysis of interatomic Contacts of Structural Units in PDB entry:
6OH9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OH9 entry

There is 1 chain in PDB entry 6OH9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 13ILE 489
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6OH9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
58 67Right-handed alpha
Helix 2
AA2
A
71 73Right-handed 310
Helix 3
AA3
A
104 109Right-handed 310
Helix 4
AA4
A
116 124Right-handed alpha
Helix 5
AA5
A
124 132Right-handed alpha
Helix 6
AA6
A
134 152Right-handed alpha
Helix 7
AA7
A
164 179Right-handed alpha
Helix 8
AA8
A
200 218Right-handed alpha
Helix 9
AA9
A
232 236Right-handed 310
Helix 10
AB1
A
237 252Right-handed alpha
Helix 11
AB2
A
262 273Right-handed alpha
Helix 12
AB3
A
278 286Right-handed alpha
Helix 13
AB4
A
302 313Right-handed alpha
Helix 14
AB5
A
319 326Right-handed alpha
Helix 15
AB6
A
332 339Right-handed alpha
Helix 16
AB7
A
356 376Right-handed alpha
Helix 17
AB8
A
377 380Right-handed 310
Helix 18
AB9
A
382 391Right-handed alpha
Helix 19
AC1
A
391 398Right-handed alpha
Helix 20
AC2
A
430 434Right-handed 310
Helix 21
AC3
A
459 471Right-handed alpha
Helix 22
AC4
A
472 474Right-handed 310
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There are 4 sheets in PDB entry 6OH9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 53first strand
Strand 2
A
35 45anti-parallel
Strand 3
A
18 27anti-parallel
Strand 4
A
75 79parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 94first strand
Strand 2
A
415 419anti-parallel
Strand 3
A
476 481anti-parallel
Strand 4
A
484 488anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 102first strand
Strand 2
A
154 160parallel
Strand 3
A
181 185parallel
Strand 4
A
224 230parallel
Strand 5
A
187 188parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 102first strand
Strand 2
A
154 160parallel
Strand 3
A
181 185parallel
Strand 4
A
224 230parallel
Strand 5
A
254 259parallel
Strand 6
A
293 297parallel
Strand 7
A
315 318parallel
Strand 8
A
342 345parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il