Analysis of interatomic Contacts of Structural Units in PDB entry:
6OHC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6OHC entry

There are 4 chains in PDB entry 6OHC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 5	ASN 439
B	HIS 6	ASN 439
C	HIS 6	ASN 439
D	GLU 5	ARG 20

There are 94 helices in PDB entry 6OHC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	24	26	Right-handed 310
Helix 2	AA2	A	27	31	Right-handed alpha
Helix 3	AA3	A	53	57	Right-handed alpha
Helix 4	AA4	A	58	60	Right-handed 310
Helix 5	AA5	A	86	88	Right-handed 310
Helix 6	AA6	A	101	105	Right-handed alpha
Helix 7	AA7	A	105	112	Right-handed alpha
Helix 8	AA8	A	115	133	Right-handed alpha
Helix 9	AA9	A	145	159	Right-handed alpha
Helix 10	AB1	A	175	179	Right-handed 310
Helix 11	AB2	A	181	197	Right-handed alpha
Helix 12	AB3	A	210	214	Right-handed 310
Helix 13	AB4	A	215	229	Right-handed alpha
Helix 14	AB5	A	241	252	Right-handed alpha
Helix 15	AB6	A	257	265	Right-handed alpha
Helix 16	AB7	A	281	292	Right-handed alpha
Helix 17	AB8	A	298	305	Right-handed alpha
Helix 18	AB9	A	311	318	Right-handed alpha
Helix 19	AC1	A	335	349	Right-handed alpha
Helix 20	AC2	A	355	364	Right-handed alpha
Helix 21	AC3	A	364	371	Right-handed alpha
Helix 22	AC4	A	396	405	Right-handed alpha
Helix 23	AC5	A	408	420	Right-handed alpha
Helix 24	AC6	A	421	423	Right-handed 310
Helix 25	AC7	B	24	26	Right-handed 310
Helix 26	AC8	B	27	31	Right-handed alpha
Helix 27	AC9	B	53	57	Right-handed alpha
Helix 28	AD1	B	58	60	Right-handed 310
Helix 29	AD2	B	86	88	Right-handed 310
Helix 30	AD3	B	100	105	Right-handed alpha
Helix 31	AD4	B	105	112	Right-handed alpha
Helix 32	AD5	B	115	133	Right-handed alpha
Helix 33	AD6	B	145	159	Right-handed alpha
Helix 34	AD7	B	175	179	Right-handed 310
Helix 35	AD8	B	181	197	Right-handed alpha
Helix 36	AD9	B	210	214	Right-handed 310
Helix 37	AE1	B	215	229	Right-handed alpha
Helix 38	AE2	B	241	252	Right-handed alpha
Helix 39	AE3	B	257	265	Right-handed alpha
Helix 40	AE4	B	281	292	Right-handed alpha
Helix 41	AE5	B	298	305	Right-handed alpha
Helix 42	AE6	B	311	318	Right-handed alpha
Helix 43	AE7	B	335	349	Right-handed alpha
Helix 44	AE8	B	355	364	Right-handed alpha
Helix 45	AE9	B	364	371	Right-handed alpha
Helix 46	AF1	B	396	406	Right-handed alpha
Helix 47	AF2	B	408	419	Right-handed alpha
Helix 48	AF3	B	421	423	Right-handed 310
Helix 49	AF4	C	24	26	Right-handed 310
Helix 50	AF5	C	27	31	Right-handed alpha
Helix 51	AF6	C	53	57	Right-handed alpha
Helix 52	AF7	C	58	60	Right-handed 310
Helix 53	AF8	C	86	88	Right-handed 310
Helix 54	AF9	C	105	112	Right-handed alpha
Helix 55	AG1	C	115	133	Right-handed alpha
Helix 56	AG2	C	145	159	Right-handed alpha
Helix 57	AG3	C	175	179	Right-handed 310
Helix 58	AG4	C	181	197	Right-handed alpha
Helix 59	AG5	C	210	214	Right-handed 310
Helix 60	AG6	C	215	229	Right-handed alpha
Helix 61	AG7	C	241	252	Right-handed alpha
Helix 62	AG8	C	257	265	Right-handed alpha
Helix 63	AG9	C	281	292	Right-handed alpha
Helix 64	AH1	C	298	305	Right-handed alpha
Helix 65	AH2	C	311	318	Right-handed alpha
Helix 66	AH3	C	335	349	Right-handed alpha
Helix 67	AH4	C	355	364	Right-handed alpha
Helix 68	AH5	C	364	371	Right-handed alpha
Helix 69	AH6	C	396	405	Right-handed alpha
Helix 70	AH7	C	408	420	Right-handed alpha
Helix 71	AH8	C	421	423	Right-handed 310
Helix 72	AH9	D	24	26	Right-handed 310
Helix 73	AI1	D	27	31	Right-handed alpha
Helix 74	AI2	D	53	57	Right-handed alpha
Helix 75	AI3	D	58	60	Right-handed 310
Helix 76	AI4	D	86	88	Right-handed 310
Helix 77	AI5	D	105	112	Right-handed alpha
Helix 78	AI6	D	115	133	Right-handed alpha
Helix 79	AI7	D	145	159	Right-handed alpha
Helix 80	AI8	D	175	179	Right-handed 310
Helix 81	AI9	D	181	197	Right-handed alpha
Helix 82	AJ1	D	210	214	Right-handed 310
Helix 83	AJ2	D	215	229	Right-handed alpha
Helix 84	AJ3	D	241	252	Right-handed alpha
Helix 85	AJ4	D	257	265	Right-handed alpha
Helix 86	AJ5	D	281	292	Right-handed alpha
Helix 87	AJ6	D	298	305	Right-handed alpha
Helix 88	AJ7	D	311	318	Right-handed alpha
Helix 89	AJ8	D	335	349	Right-handed alpha
Helix 90	AJ9	D	355	364	Right-handed alpha
Helix 91	AK1	D	364	371	Right-handed alpha
Helix 92	AK2	D	396	405	Right-handed alpha
Helix 93	AK3	D	408	420	Right-handed alpha
Helix 94	AK4	D	421	423	Right-handed 310

There are 12 sheets in PDB entry 6OHC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	52	first strand
Strand 2	A	32	43	anti-parallel
Strand 3	A	9	18	anti-parallel
Strand 4	A	66	76	parallel
Strand 5	A	388	391	anti-parallel
Strand 6	A	425	430	anti-parallel
Strand 7	A	433	437	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	78	84	first strand
Strand 2	A	135	141	parallel
Strand 3	A	164	166	parallel
Strand 4	A	203	208	parallel
Strand 5	A	168	169	parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	78	84	first strand
Strand 2	A	135	141	parallel
Strand 3	A	164	166	parallel
Strand 4	A	203	208	parallel
Strand 5	A	233	238	parallel
Strand 6	A	272	276	parallel
Strand 7	A	294	297	parallel
Strand 8	A	322	324	parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	52	first strand
Strand 2	B	32	43	anti-parallel
Strand 3	B	9	18	anti-parallel
Strand 4	B	67	76	parallel
Strand 5	B	388	391	anti-parallel
Strand 6	B	425	430	anti-parallel
Strand 7	B	433	437	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	78	84	first strand
Strand 2	B	135	141	parallel
Strand 3	B	164	166	parallel
Strand 4	B	203	208	parallel
Strand 5	B	168	169	parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	78	84	first strand
Strand 2	B	135	141	parallel
Strand 3	B	164	166	parallel
Strand 4	B	203	208	parallel
Strand 5	B	233	238	parallel
Strand 6	B	272	276	parallel
Strand 7	B	294	297	parallel
Strand 8	B	321	324	parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	46	52	first strand
Strand 2	C	32	43	anti-parallel
Strand 3	C	9	18	anti-parallel
Strand 4	C	67	76	parallel
Strand 5	C	388	391	anti-parallel
Strand 6	C	425	430	anti-parallel
Strand 7	C	433	437	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	78	84	first strand
Strand 2	C	135	141	parallel
Strand 3	C	164	166	parallel
Strand 4	C	203	208	parallel
Strand 5	C	168	169	parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	78	84	first strand
Strand 2	C	135	141	parallel
Strand 3	C	164	166	parallel
Strand 4	C	203	208	parallel
Strand 5	C	233	238	parallel
Strand 6	C	272	276	parallel
Strand 7	C	294	297	parallel
Strand 8	C	322	324	parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	46	52	first strand
Strand 2	D	32	43	anti-parallel
Strand 3	D	9	18	anti-parallel
Strand 4	D	66	76	parallel
Strand 5	D	388	391	anti-parallel
Strand 6	D	425	430	anti-parallel
Strand 7	D	433	437	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	78	84	first strand
Strand 2	D	135	141	parallel
Strand 3	D	164	166	parallel
Strand 4	D	203	208	parallel
Strand 5	D	168	169	parallel

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There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	78	84	first strand
Strand 2	D	135	141	parallel
Strand 3	D	164	166	parallel
Strand 4	D	203	208	parallel
Strand 5	D	233	238	parallel
Strand 6	D	272	276	parallel
Strand 7	D	294	297	parallel
Strand 8	D	321	324	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6OHC

Analysis of interatomic Contacts of Structural Units in PDB entry:
6OHC