Analysis of interatomic Contacts of Structural Units in PDB entry:
6OHO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6OHO entry

There are 2 chains in PDB entry 6OHO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 315	THR 933
B	ARG 315	THR 933

There are 40 helices in PDB entry 6OHO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	321	325	Right-handed 310
Helix 2	AA2	A	340	354	Right-handed alpha
Helix 3	AA3	A	382	393	Right-handed alpha
Helix 4	AA4	A	412	424	Right-handed alpha
Helix 5	AA5	A	507	511	Right-handed 310
Helix 6	AA6	A	549	568	Right-handed alpha
Helix 7	AA7	A	570	575	Right-handed alpha
Helix 8	AA8	A	621	633	Right-handed alpha
Helix 9	AA9	A	656	672	Right-handed alpha
Helix 10	AB1	A	696	711	Right-handed alpha
Helix 11	AB2	A	716	726	Right-handed alpha
Helix 12	AB3	A	727	731	Right-handed 310
Helix 13	AB4	A	775	780	Right-handed alpha
Helix 14	AB5	A	810	825	Right-handed alpha
Helix 15	AB6	A	839	862	Right-handed alpha
Helix 16	AB7	A	871	880	Right-handed alpha
Helix 17	AB8	A	883	888	Right-handed alpha
Helix 18	AB9	A	888	897	Right-handed alpha
Helix 19	AC1	A	928	932	Right-handed 310
Helix 20	AC2	B	321	325	Right-handed 310
Helix 21	AC3	B	340	354	Right-handed alpha
Helix 22	AC4	B	382	392	Right-handed alpha
Helix 23	AC5	B	412	422	Right-handed alpha
Helix 24	AC6	B	507	511	Right-handed 310
Helix 25	AC7	B	549	568	Right-handed alpha
Helix 26	AC8	B	570	575	Right-handed alpha
Helix 27	AC9	B	621	633	Right-handed alpha
Helix 28	AD1	B	656	672	Right-handed alpha
Helix 29	AD2	B	690	694	Right-handed 310
Helix 30	AD3	B	696	711	Right-handed alpha
Helix 31	AD4	B	716	726	Right-handed alpha
Helix 32	AD5	B	727	731	Right-handed 310
Helix 33	AD6	B	775	780	Right-handed alpha
Helix 34	AD7	B	810	825	Right-handed alpha
Helix 35	AD8	B	826	829	Right-handed 310
Helix 36	AD9	B	839	862	Right-handed alpha
Helix 37	AE1	B	871	879	Right-handed alpha
Helix 38	AE2	B	883	888	Right-handed alpha
Helix 39	AE3	B	888	897	Right-handed alpha
Helix 40	AE4	B	928	932	Right-handed 310

There are 8 sheets in PDB entry 6OHO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 15 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	427	432	first strand
Strand 2	A	396	402	parallel
Strand 3	A	358	363	parallel
Strand 4	A	445	448	anti-parallel
Strand 5	A	452	456	anti-parallel
Strand 6	A	543	548	anti-parallel
Strand 7	A	330	339	anti-parallel
Strand 8	A	600	610	anti-parallel
Strand 9	A	786	793	anti-parallel
Strand 10	A	766	770	anti-parallel
Strand 11	A	758	762	anti-parallel
Strand 12	A	636	641	anti-parallel
Strand 13	A	676	680	parallel
Strand 14	A	733	744	parallel
Strand 15	A	747	752	anti-parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	619	620	first strand
Strand 2	A	600	610	anti-parallel
Strand 3	A	786	793	anti-parallel
Strand 4	A	766	770	anti-parallel
Strand 5	A	758	762	anti-parallel
Strand 6	A	636	641	anti-parallel
Strand 7	A	676	680	parallel
Strand 8	A	733	744	parallel
Strand 9	A	903	905	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	540	541	first strand
Strand 2	A	754	755	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	796	801	first strand
Strand 2	A	804	809	anti-parallel

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There are 15 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	427	432	first strand
Strand 2	B	396	402	parallel
Strand 3	B	358	363	parallel
Strand 4	B	445	448	anti-parallel
Strand 5	B	452	456	anti-parallel
Strand 6	B	543	548	anti-parallel
Strand 7	B	330	339	anti-parallel
Strand 8	B	600	610	anti-parallel
Strand 9	B	786	793	anti-parallel
Strand 10	B	766	770	anti-parallel
Strand 11	B	758	762	anti-parallel
Strand 12	B	636	641	anti-parallel
Strand 13	B	676	680	parallel
Strand 14	B	733	744	parallel
Strand 15	B	747	752	anti-parallel

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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	619	620	first strand
Strand 2	B	600	610	anti-parallel
Strand 3	B	786	793	anti-parallel
Strand 4	B	766	770	anti-parallel
Strand 5	B	758	762	anti-parallel
Strand 6	B	636	641	anti-parallel
Strand 7	B	676	680	parallel
Strand 8	B	733	744	parallel
Strand 9	B	903	905	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	540	541	first strand
Strand 2	B	754	755	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	796	801	first strand
Strand 2	B	804	809	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6OHO

Analysis of interatomic Contacts of Structural Units in PDB entry:
6OHO