Analysis of interatomic Contacts of Structural Units in PDB entry:
6OHY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6OHY entry

There are 5 chains in PDB entry 6OHY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 32	TYR 504
B	LEU 515	ASP 664
C	GLU 32	TYR 504
E	LEU 515	ASP 664
D	GLU 32	ASN 197

There are 39 helices in PDB entry 6OHY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	98	116	Right-handed alpha
Helix 2	AA2	A	122	126	Right-handed 310
Helix 3	AA3	A	145	148	Right-handed 310
Helix 4	AA4	A	334	354	Right-handed alpha
Helix 5	AA5	A	392	397	Right-handed alpha
Helix 6	AA6	A	475	481	Right-handed alpha
Helix 7	AA7	B	523	528	Right-handed 310
Helix 8	AA8	B	529	533	Right-handed 310
Helix 9	AA9	B	570	595	Right-handed alpha
Helix 10	AB1	B	618	626	Right-handed alpha
Helix 11	AB2	B	627	636	Right-handed alpha
Helix 12	AB3	B	638	652	Right-handed alpha
Helix 13	AB4	B	652	660	Right-handed alpha
Helix 14	AB5	C	98	116	Right-handed alpha
Helix 15	AB6	C	122	126	Right-handed 310
Helix 16	AB7	C	145	148	Right-handed 310
Helix 17	AB8	C	334	354	Right-handed alpha
Helix 18	AB9	C	392	397	Right-handed alpha
Helix 19	AC1	C	475	481	Right-handed alpha
Helix 20	AC2	E	523	528	Right-handed 310
Helix 21	AC3	E	529	533	Right-handed 310
Helix 22	AC4	E	570	595	Right-handed alpha
Helix 23	AC5	E	618	626	Right-handed alpha
Helix 24	AC6	E	627	636	Right-handed alpha
Helix 25	AC7	E	638	652	Right-handed alpha
Helix 26	AC8	E	652	660	Right-handed alpha
Helix 27	AC9	D	98	116	Right-handed alpha
Helix 28	AD1	D	122	126	Right-handed 310
Helix 29	AD2	D	145	148	Right-handed 310
Helix 30	AD3	D	334	354	Right-handed alpha
Helix 31	AD4	D	392	397	Right-handed alpha
Helix 32	AD5	D	475	481	Right-handed alpha
Helix 33	AD6	F	523	528	Right-handed 310
Helix 34	AD7	F	529	533	Right-handed 310
Helix 35	AD8	F	570	595	Right-handed alpha
Helix 36	AD9	F	618	626	Right-handed alpha
Helix 37	AE1	F	627	636	Right-handed alpha
Helix 38	AE2	F	638	652	Right-handed alpha
Helix 39	AE3	F	652	660	Right-handed alpha

There are 27 sheets in PDB entry 6OHY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	36	37	first strand
Strand 2	A	497	498	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	47	first strand
Strand 2	A	486	491	anti-parallel
Strand 3	A	223	228	anti-parallel
Strand 4	A	242	245	anti-parallel
Strand 5	A	83	86	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	55	first strand
Strand 2	A	216	218	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	91	94	first strand
Strand 2	A	236	239	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	169	177	first strand
Strand 2	A	154	162	anti-parallel
Strand 3	A	128	132	anti-parallel
Strand 4	A	191	193	anti-parallel
Strand 5	A	181	183	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	201	203	first strand
Strand 2	A	433	435	parallel
Strand 3	A	423	425	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	260	261	first strand
Strand 2	A	443	455	anti-parallel
Strand 3	A	283	298	anti-parallel
Strand 4	A	271	274	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	260	261	first strand
Strand 2	A	443	455	anti-parallel
Strand 3	A	283	298	anti-parallel
Strand 4	A	330	333	anti-parallel
Strand 5	A	414	421	anti-parallel
Strand 6	A	382	385	anti-parallel
Strand 7	A	374	375	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	302	310	first strand
Strand 2	A	316	322	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	36	37	first strand
Strand 2	C	497	498	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	45	47	first strand
Strand 2	C	486	491	anti-parallel
Strand 3	C	223	228	anti-parallel
Strand 4	C	242	245	anti-parallel
Strand 5	C	83	86	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	55	first strand
Strand 2	C	216	218	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	91	94	first strand
Strand 2	C	236	239	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	169	177	first strand
Strand 2	C	154	162	anti-parallel
Strand 3	C	128	132	anti-parallel
Strand 4	C	191	193	anti-parallel
Strand 5	C	181	183	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	201	203	first strand
Strand 2	C	433	435	parallel
Strand 3	C	423	425	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	260	261	first strand
Strand 2	C	443	455	anti-parallel
Strand 3	C	283	298	anti-parallel
Strand 4	C	271	274	anti-parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	260	261	first strand
Strand 2	C	443	455	anti-parallel
Strand 3	C	283	298	anti-parallel
Strand 4	C	330	333	anti-parallel
Strand 5	C	414	421	anti-parallel
Strand 6	C	382	385	anti-parallel
Strand 7	C	374	375	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	302	310	first strand
Strand 2	C	316	322	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	36	37	first strand
Strand 2	D	497	498	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	45	47	first strand
Strand 2	D	486	491	anti-parallel
Strand 3	D	223	228	anti-parallel
Strand 4	D	242	245	anti-parallel
Strand 5	D	83	86	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	55	first strand
Strand 2	D	216	218	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	91	94	first strand
Strand 2	D	236	239	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	169	177	first strand
Strand 2	D	154	162	anti-parallel
Strand 3	D	128	132	anti-parallel
Strand 4	D	191	193	anti-parallel
Strand 5	D	181	183	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	201	203	first strand
Strand 2	D	433	435	parallel
Strand 3	D	423	425	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	260	261	first strand
Strand 2	D	443	455	anti-parallel
Strand 3	D	283	298	anti-parallel
Strand 4	D	271	274	anti-parallel

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There are 7 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	260	261	first strand
Strand 2	D	443	455	anti-parallel
Strand 3	D	283	298	anti-parallel
Strand 4	D	330	333	anti-parallel
Strand 5	D	414	421	anti-parallel
Strand 6	D	382	385	anti-parallel
Strand 7	D	374	375	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	302	310	first strand
Strand 2	D	316	322	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6OHY

Analysis of interatomic Contacts of Structural Units in PDB entry:
6OHY