Analysis of interatomic Contacts of Structural Units in PDB entry:
6OIH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OIH entry

There are 4 chains in PDB entry 6OIH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 2HIS 238
B
 ILE 2HIS 239
D
 ASN 2PHE 255
C
 ASN 2PHE 255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 6OIH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 23Right-handed alpha
Helix 2
AA2
A
58 69Right-handed alpha
Helix 3
AA3
A
87 92Right-handed 310
Helix 4
AA4
A
99 110Right-handed alpha
Helix 5
AA5
A
114 130Right-handed alpha
Helix 6
AA6
A
138 142Right-handed 310
Helix 7
AA7
A
143 156Right-handed alpha
Helix 8
AA8
A
173 190Right-handed alpha
Helix 9
AA9
A
200 208Right-handed alpha
Helix 10
AB1
A
224 237Right-handed alpha
Helix 11
AB2
B
16 26Right-handed alpha
Helix 12
AB3
B
57 68Right-handed alpha
Helix 13
AB4
B
99 111Right-handed alpha
Helix 14
AB5
B
114 130Right-handed alpha
Helix 15
AB6
B
131 135Right-handed 310
Helix 16
AB7
B
138 142Right-handed 310
Helix 17
AB8
B
145 156Right-handed alpha
Helix 18
AB9
B
174 190Right-handed alpha
Helix 19
AC1
B
200 208Right-handed alpha
Helix 20
AC2
B
224 232Right-handed alpha
Helix 21
AC3
D
3 19Right-handed alpha
Helix 22
AC4
D
23 48Right-handed alpha
Helix 23
AC5
D
58 88Right-handed alpha
Helix 24
AC6
D
88 93Right-handed alpha
Helix 25
AC7
D
100 129Right-handed alpha
Helix 26
AC8
D
130 135Right-handed alpha
Helix 27
AC9
D
136 138Right-handed 310
Helix 28
AD1
D
139 166Right-handed alpha
Helix 29
AD2
D
167 180Right-handed alpha
Helix 30
AD3
D
181 183Right-handed 310
Helix 31
AD4
D
188 192Right-handed 310
Helix 32
AD5
D
193 201Right-handed alpha
Helix 33
AD6
D
204 217Right-handed alpha
Helix 34
AD7
D
223 253Right-handed alpha
Helix 35
AD8
C
3 19Right-handed alpha
Helix 36
AD9
C
23 48Right-handed alpha
Helix 37
AE1
C
57 88Right-handed alpha
Helix 38
AE2
C
88 93Right-handed alpha
Helix 39
AE3
C
100 129Right-handed alpha
Helix 40
AE4
C
130 135Right-handed alpha
Helix 41
AE5
C
136 138Right-handed 310
Helix 42
AE6
C
139 166Right-handed alpha
Helix 43
AE7
C
167 180Right-handed alpha
Helix 44
AE8
C
181 183Right-handed 310
Helix 45
AE9
C
188 192Right-handed 310
Helix 46
AF1
C
193 202Right-handed alpha
Helix 47
AF2
C
204 217Right-handed alpha
Helix 48
AF3
C
223 253Right-handed alpha
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There are 4 sheets in PDB entry 6OIH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 43first strand
Strand 2
A
3 10anti-parallel
Strand 3
A
75 79anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 166first strand
Strand 2
A
193 197parallel
Strand 3
A
48 53parallel
Strand 4
A
210 214parallel
Strand 5
A
219 223anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 40first strand
Strand 2
B
3 10anti-parallel
Strand 3
B
75 79anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
84 85first strand
Strand 2
B
162 166parallel
Strand 3
B
193 197parallel
Strand 4
B
49 52parallel
Strand 5
B
210 214parallel
Strand 6
B
219 223anti-parallel
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