Analysis of interatomic Contacts of Structural Units in PDB entry:
6OIU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6OIU entry

There are 4 chains in PDB entry 6OIU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 520	GLU 1416
B	PRO 520	HIS 1421
C	PRO 520	HIS 1421
D	GLU 522	GLU 1415

There are157 helices in PDB entry 6OIU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	526	528	Right-handed 310
Helix 2	AA2	A	614	618	Right-handed 310
Helix 3	AA3	A	660	664	Right-handed 310
Helix 4	AA4	A	723	725	Right-handed 310
Helix 5	AA5	A	754	758	Right-handed 310
Helix 6	AA6	A	761	780	Right-handed alpha
Helix 7	AA7	A	812	814	Right-handed 310
Helix 8	AA8	A	822	839	Right-handed alpha
Helix 9	AA9	A	850	852	Right-handed 310
Helix 10	AB1	A	853	873	Right-handed alpha
Helix 11	AB2	A	874	895	Right-handed alpha
Helix 12	AB3	A	909	914	Right-handed 310
Helix 13	AB4	A	915	934	Right-handed alpha
Helix 14	AB5	A	934	950	Right-handed alpha
Helix 15	AB6	A	955	968	Right-handed alpha
Helix 16	AB7	A	972	974	Right-handed 310
Helix 17	AB8	A	975	980	Right-handed alpha
Helix 18	AB9	A	1068	1071	Right-handed 310
Helix 19	AC1	A	1081	1092	Right-handed alpha
Helix 20	AC2	A	1094	1121	Right-handed alpha
Helix 21	AC3	A	1131	1144	Right-handed alpha
Helix 22	AC4	A	1148	1157	Right-handed alpha
Helix 23	AC5	A	1160	1166	Right-handed alpha
Helix 24	AC6	A	1172	1191	Right-handed alpha
Helix 25	AC7	A	1191	1202	Right-handed alpha
Helix 26	AC8	A	1214	1232	Right-handed alpha
Helix 27	AC9	A	1236	1249	Right-handed alpha
Helix 28	AD1	A	1252	1264	Right-handed alpha
Helix 29	AD2	A	1268	1283	Right-handed alpha
Helix 30	AD3	A	1285	1298	Right-handed alpha
Helix 31	AD4	A	1303	1312	Right-handed alpha
Helix 32	AD5	A	1321	1334	Right-handed alpha
Helix 33	AD6	A	1335	1340	Right-handed 310
Helix 34	AD7	A	1343	1358	Right-handed alpha
Helix 35	AD8	A	1360	1369	Right-handed alpha
Helix 36	AD9	A	1370	1372	Right-handed 310
Helix 37	AE1	A	1373	1377	Right-handed 310
Helix 38	AE2	A	1378	1394	Right-handed alpha
Helix 39	AE3	A	1399	1410	Right-handed alpha
Helix 40	AE4	B	526	528	Right-handed 310
Helix 41	AE5	B	591	597	Right-handed alpha
Helix 42	AE6	B	614	618	Right-handed 310
Helix 43	AE7	B	660	664	Right-handed 310
Helix 44	AE8	B	723	725	Right-handed 310
Helix 45	AE9	B	754	758	Right-handed 310
Helix 46	AF1	B	761	780	Right-handed alpha
Helix 47	AF2	B	812	814	Right-handed 310
Helix 48	AF3	B	822	839	Right-handed alpha
Helix 49	AF4	B	850	852	Right-handed 310
Helix 50	AF5	B	853	873	Right-handed alpha
Helix 51	AF6	B	874	895	Right-handed alpha
Helix 52	AF7	B	909	914	Right-handed 310
Helix 53	AF8	B	915	950	Right-handed alpha
Helix 54	AF9	B	955	968	Right-handed alpha
Helix 55	AG1	B	972	974	Right-handed 310
Helix 56	AG2	B	975	980	Right-handed alpha
Helix 57	AG3	B	1068	1071	Right-handed 310
Helix 58	AG4	B	1081	1092	Right-handed alpha
Helix 59	AG5	B	1094	1121	Right-handed alpha
Helix 60	AG6	B	1131	1144	Right-handed alpha
Helix 61	AG7	B	1148	1157	Right-handed alpha
Helix 62	AG8	B	1160	1166	Right-handed alpha
Helix 63	AG9	B	1172	1191	Right-handed alpha
Helix 64	AH1	B	1191	1202	Right-handed alpha
Helix 65	AH2	B	1214	1232	Right-handed alpha
Helix 66	AH3	B	1236	1249	Right-handed alpha
Helix 67	AH4	B	1252	1264	Right-handed alpha
Helix 68	AH5	B	1268	1283	Right-handed alpha
Helix 69	AH6	B	1285	1298	Right-handed alpha
Helix 70	AH7	B	1303	1312	Right-handed alpha
Helix 71	AH8	B	1321	1335	Right-handed alpha
Helix 72	AH9	B	1336	1340	Right-handed 310
Helix 73	AI1	B	1343	1357	Right-handed alpha
Helix 74	AI2	B	1360	1369	Right-handed alpha
Helix 75	AI3	B	1370	1372	Right-handed 310
Helix 76	AI4	B	1373	1377	Right-handed 310
Helix 77	AI5	B	1378	1394	Right-handed alpha
Helix 78	AI6	B	1399	1410	Right-handed alpha
Helix 79	AI7	C	526	528	Right-handed 310
Helix 80	AI8	C	591	597	Right-handed alpha
Helix 81	AI9	C	614	618	Right-handed 310
Helix 82	AJ1	C	660	664	Right-handed 310
Helix 83	AJ2	C	721	725	Right-handed 310
Helix 84	AJ3	C	754	758	Right-handed 310
Helix 85	AJ4	C	761	780	Right-handed alpha
Helix 86	AJ5	C	812	814	Right-handed 310
Helix 87	AJ6	C	822	839	Right-handed alpha
Helix 88	AJ7	C	850	852	Right-handed 310
Helix 89	AJ8	C	853	873	Right-handed alpha
Helix 90	AJ9	C	874	895	Right-handed alpha
Helix 91	AK1	C	909	914	Right-handed 310
Helix 92	AK2	C	915	950	Right-handed alpha
Helix 93	AK3	C	955	968	Right-handed alpha
Helix 94	AK4	C	972	974	Right-handed 310
Helix 95	AK5	C	975	980	Right-handed alpha
Helix 96	AK6	C	1068	1071	Right-handed 310
Helix 97	AK7	C	1081	1092	Right-handed alpha
Helix 98	AK8	C	1094	1121	Right-handed alpha
Helix 99	AK9	C	1131	1144	Right-handed alpha
Helix 100	AL1	C	1148	1157	Right-handed alpha
Helix 101	AL2	C	1160	1166	Right-handed alpha
Helix 102	AL3	C	1172	1191	Right-handed alpha
Helix 103	AL4	C	1191	1202	Right-handed alpha
Helix 104	AL5	C	1214	1232	Right-handed alpha
Helix 105	AL6	C	1236	1250	Right-handed alpha
Helix 106	AL7	C	1252	1264	Right-handed alpha
Helix 107	AL8	C	1268	1283	Right-handed alpha
Helix 108	AL9	C	1285	1298	Right-handed alpha
Helix 109	AM1	C	1303	1312	Right-handed alpha
Helix 110	AM2	C	1321	1333	Right-handed alpha
Helix 111	AM3	C	1334	1340	Right-handed 310
Helix 112	AM4	C	1343	1357	Right-handed alpha
Helix 113	AM5	C	1360	1369	Right-handed alpha
Helix 114	AM6	C	1370	1372	Right-handed 310
Helix 115	AM7	C	1373	1377	Right-handed 310
Helix 116	AM8	C	1378	1394	Right-handed alpha
Helix 117	AM9	C	1399	1410	Right-handed alpha
Helix 118	AN1	D	526	528	Right-handed 310
Helix 119	AN2	D	591	598	Right-handed alpha
Helix 120	AN3	D	614	618	Right-handed 310
Helix 121	AN4	D	660	664	Right-handed 310
Helix 122	AN5	D	723	725	Right-handed 310
Helix 123	AN6	D	754	758	Right-handed 310
Helix 124	AN7	D	761	780	Right-handed alpha
Helix 125	AN8	D	812	814	Right-handed 310
Helix 126	AN9	D	822	839	Right-handed alpha
Helix 127	AO1	D	850	852	Right-handed 310
Helix 128	AO2	D	853	873	Right-handed alpha
Helix 129	AO3	D	874	887	Right-handed alpha
Helix 130	AO4	D	888	895	Right-handed alpha
Helix 131	AO5	D	909	914	Right-handed 310
Helix 132	AO6	D	915	950	Right-handed alpha
Helix 133	AO7	D	955	968	Right-handed alpha
Helix 134	AO8	D	972	974	Right-handed 310
Helix 135	AO9	D	975	980	Right-handed alpha
Helix 136	AP1	D	1067	1071	Right-handed 310
Helix 137	AP2	D	1081	1092	Right-handed alpha
Helix 138	AP3	D	1094	1121	Right-handed alpha
Helix 139	AP4	D	1131	1143	Right-handed alpha
Helix 140	AP5	D	1149	1157	Right-handed alpha
Helix 141	AP6	D	1160	1166	Right-handed alpha
Helix 142	AP7	D	1172	1191	Right-handed alpha
Helix 143	AP8	D	1191	1202	Right-handed alpha
Helix 144	AP9	D	1214	1232	Right-handed alpha
Helix 145	AQ1	D	1236	1249	Right-handed alpha
Helix 146	AQ2	D	1252	1264	Right-handed alpha
Helix 147	AQ3	D	1268	1281	Right-handed alpha
Helix 148	AQ4	D	1285	1298	Right-handed alpha
Helix 149	AQ5	D	1303	1312	Right-handed alpha
Helix 150	AQ6	D	1321	1334	Right-handed alpha
Helix 151	AQ7	D	1335	1340	Right-handed 310
Helix 152	AQ8	D	1343	1357	Right-handed alpha
Helix 153	AQ9	D	1360	1369	Right-handed alpha
Helix 154	AR1	D	1370	1372	Right-handed 310
Helix 155	AR2	D	1373	1377	Right-handed 310
Helix 156	AR3	D	1378	1394	Right-handed alpha
Helix 157	AR4	D	1399	1410	Right-handed alpha

There are 27 sheets in PDB entry 6OIU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	523	524	first strand
Strand 2	A	906	907	anti-parallel

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There are 16 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	568	570	first strand
Strand 2	A	611	613	anti-parallel
Strand 3	A	602	605	anti-parallel
Strand 4	A	585	589	parallel
Strand 5	A	576	582	anti-parallel
Strand 6	A	626	634	anti-parallel
Strand 7	A	549	559	anti-parallel
Strand 8	A	533	543	anti-parallel
Strand 9	A	674	684	parallel
Strand 10	A	709	721	anti-parallel
Strand 11	A	696	702	anti-parallel
Strand 12	D	733	740	anti-parallel
Strand 13	D	746	753	anti-parallel
Strand 14	D	787	793	parallel
Strand 15	D	806	810	parallel
Strand 16	D	800	801	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	644	648	first strand
Strand 2	A	651	655	anti-parallel
Strand 3	A	727	730	anti-parallel
Strand 4	A	690	693	anti-parallel

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There are 13 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	800	801	first strand
Strand 2	A	806	810	anti-parallel
Strand 3	A	787	793	parallel
Strand 4	A	746	753	parallel
Strand 5	A	733	740	anti-parallel
Strand 6	D	696	702	anti-parallel
Strand 7	D	709	721	anti-parallel
Strand 8	D	674	684	anti-parallel
Strand 9	D	533	543	parallel
Strand 10	D	549	559	anti-parallel
Strand 11	D	626	634	anti-parallel
Strand 12	D	576	582	anti-parallel
Strand 13	D	585	586	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	847	848	first strand
Strand 2	A	953	954	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1051	1057	first strand
Strand 2	A	999	1007	anti-parallel
Strand 3	A	985	994	anti-parallel
Strand 4	A	1075	1077	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1043	1047	first strand
Strand 2	A	1022	1030	anti-parallel
Strand 3	A	1062	1066	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	523	524	first strand
Strand 2	B	906	907	anti-parallel

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There are 11 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	568	570	first strand
Strand 2	B	611	613	anti-parallel
Strand 3	B	602	605	anti-parallel
Strand 4	B	585	589	parallel
Strand 5	B	576	582	anti-parallel
Strand 6	B	626	634	anti-parallel
Strand 7	B	549	559	anti-parallel
Strand 8	B	533	543	anti-parallel
Strand 9	B	674	684	parallel
Strand 10	B	709	721	anti-parallel
Strand 11	B	696	702	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	644	648	first strand
Strand 2	B	651	655	anti-parallel
Strand 3	B	727	730	anti-parallel
Strand 4	B	690	693	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	733	740	first strand
Strand 2	B	746	753	anti-parallel
Strand 3	B	787	793	parallel
Strand 4	B	806	810	parallel
Strand 5	B	800	801	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	847	848	first strand
Strand 2	B	953	954	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1051	1057	first strand
Strand 2	B	999	1007	anti-parallel
Strand 3	B	985	994	anti-parallel
Strand 4	B	1075	1077	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1043	1047	first strand
Strand 2	B	1022	1030	anti-parallel
Strand 3	B	1062	1066	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	523	524	first strand
Strand 2	C	906	907	anti-parallel

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There are 11 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	568	570	first strand
Strand 2	C	611	613	anti-parallel
Strand 3	C	602	605	anti-parallel
Strand 4	C	585	589	parallel
Strand 5	C	576	582	anti-parallel
Strand 6	C	626	634	anti-parallel
Strand 7	C	549	559	anti-parallel
Strand 8	C	533	543	anti-parallel
Strand 9	C	675	684	parallel
Strand 10	C	709	720	anti-parallel
Strand 11	C	696	702	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	644	648	first strand
Strand 2	C	651	655	anti-parallel
Strand 3	C	727	730	anti-parallel
Strand 4	C	690	693	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	733	740	first strand
Strand 2	C	746	753	anti-parallel
Strand 3	C	787	793	parallel
Strand 4	C	806	810	parallel
Strand 5	C	800	801	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	846	848	first strand
Strand 2	C	952	954	parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1051	1057	first strand
Strand 2	C	999	1007	anti-parallel
Strand 3	C	985	994	anti-parallel
Strand 4	C	1075	1077	parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1043	1047	first strand
Strand 2	C	1022	1030	anti-parallel
Strand 3	C	1062	1066	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	523	524	first strand
Strand 2	D	906	907	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	568	570	first strand
Strand 2	D	611	613	anti-parallel
Strand 3	D	602	605	anti-parallel
Strand 4	D	588	589	parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	644	648	first strand
Strand 2	D	651	655	anti-parallel
Strand 3	D	727	730	anti-parallel
Strand 4	D	690	693	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	846	848	first strand
Strand 2	D	952	954	parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1051	1057	first strand
Strand 2	D	999	1007	anti-parallel
Strand 3	D	985	994	anti-parallel
Strand 4	D	1075	1077	parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1043	1047	first strand
Strand 2	D	1022	1030	anti-parallel
Strand 3	D	1062	1065	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6OIU

Analysis of interatomic Contacts of Structural Units in PDB entry:
6OIU