Analysis of interatomic Contacts of Structural Units in PDB entry:
6OIV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OIV entry

There are 6 chains in PDB entry 6OIV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2GLU 504
B
 GLN 3GLU 504
C
 GLN 3GLU 504
D
 GLN 3GLU 504
E
 GLN 3GLU 504
F
 GLN 3GLU 504
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are159 helices in PDB entry 6OIV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 9Right-handed 310
Helix 2
AA2
A
24 42Right-handed alpha
Helix 3
AA3
A
42 50Right-handed alpha
Helix 4
AA4
A
65 91Right-handed alpha
Helix 5
AA5
A
92 97Right-handed alpha
Helix 6
AA6
A
102 116Right-handed alpha
Helix 7
AA7
A
124 141Right-handed alpha
Helix 8
AA8
A
142 146Right-handed 310
Helix 9
AA9
A
168 182Right-handed alpha
Helix 10
AB1
A
184 195Right-handed alpha
Helix 11
AB2
A
202 209Right-handed alpha
Helix 12
AB3
A
239 251Right-handed alpha
Helix 13
AB4
A
260 283Right-handed alpha
Helix 14
AB5
A
287 300Right-handed alpha
Helix 15
AB6
A
306 320Right-handed alpha
Helix 16
AB7
A
328 355Right-handed alpha
Helix 17
AB8
A
355 361Right-handed alpha
Helix 18
AB9
A
373 390Right-handed alpha
Helix 19
AC1
A
393 414Right-handed alpha
Helix 20
AC2
A
414 419Right-handed alpha
Helix 21
AC3
A
421 431Right-handed alpha
Helix 22
AC4
A
437 446Right-handed alpha
Helix 23
AC5
A
448 461Right-handed alpha
Helix 24
AC6
A
468 488Right-handed alpha
Helix 25
AC7
A
489 502Right-handed alpha
Helix 26
AC8
B
5 9Right-handed 310
Helix 27
AC9
B
24 42Right-handed alpha
Helix 28
AD1
B
42 47Right-handed alpha
Helix 29
AD2
B
48 51Right-handed 310
Helix 30
AD3
B
65 91Right-handed alpha
Helix 31
AD4
B
92 97Right-handed alpha
Helix 32
AD5
B
102 116Right-handed alpha
Helix 33
AD6
B
126 141Right-handed alpha
Helix 34
AD7
B
142 146Right-handed 310
Helix 35
AD8
B
170 182Right-handed alpha
Helix 36
AD9
B
184 196Right-handed alpha
Helix 37
AE1
B
202 209Right-handed alpha
Helix 38
AE2
B
223 231Right-handed 310
Helix 39
AE3
B
239 251Right-handed alpha
Helix 40
AE4
B
260 283Right-handed alpha
Helix 41
AE5
B
287 300Right-handed alpha
Helix 42
AE6
B
306 320Right-handed alpha
Helix 43
AE7
B
328 355Right-handed alpha
Helix 44
AE8
B
355 361Right-handed alpha
Helix 45
AE9
B
373 390Right-handed alpha
Helix 46
AF1
B
393 414Right-handed alpha
Helix 47
AF2
B
414 419Right-handed alpha
Helix 48
AF3
B
421 431Right-handed alpha
Helix 49
AF4
B
437 446Right-handed alpha
Helix 50
AF5
B
448 461Right-handed alpha
Helix 51
AF6
B
468 488Right-handed alpha
Helix 52
AF7
B
489 502Right-handed alpha
Helix 53
AF8
C
5 9Right-handed 310
Helix 54
AF9
C
24 42Right-handed alpha
Helix 55
AG1
C
42 47Right-handed alpha
Helix 56
AG2
C
48 51Right-handed 310
Helix 57
AG3
C
65 91Right-handed alpha
Helix 58
AG4
C
92 97Right-handed alpha
Helix 59
AG5
C
102 116Right-handed alpha
Helix 60
AG6
C
125 141Right-handed alpha
Helix 61
AG7
C
142 146Right-handed 310
Helix 62
AG8
C
168 182Right-handed alpha
Helix 63
AG9
C
184 196Right-handed alpha
Helix 64
AH1
C
202 210Right-handed alpha
Helix 65
AH2
C
223 231Right-handed 310
Helix 66
AH3
C
239 251Right-handed alpha
Helix 67
AH4
C
260 283Right-handed alpha
Helix 68
AH5
C
287 300Right-handed alpha
Helix 69
AH6
C
306 320Right-handed alpha
Helix 70
AH7
C
328 355Right-handed alpha
Helix 71
AH8
C
355 361Right-handed alpha
Helix 72
AH9
C
373 390Right-handed alpha
Helix 73
AI1
C
393 414Right-handed alpha
Helix 74
AI2
C
414 419Right-handed alpha
Helix 75
AI3
C
421 431Right-handed alpha
Helix 76
AI4
C
437 447Right-handed alpha
Helix 77
AI5
C
448 461Right-handed alpha
Helix 78
AI6
C
468 488Right-handed alpha
Helix 79
AI7
C
489 502Right-handed alpha
Helix 80
AI8
D
5 9Right-handed 310
Helix 81
AI9
D
24 41Right-handed alpha
Helix 82
AJ1
D
42 47Right-handed alpha
Helix 83
AJ2
D
48 51Right-handed 310
Helix 84
AJ3
D
65 91Right-handed alpha
Helix 85
AJ4
D
92 97Right-handed alpha
Helix 86
AJ5
D
102 116Right-handed alpha
Helix 87
AJ6
D
125 141Right-handed alpha
Helix 88
AJ7
D
142 146Right-handed 310
Helix 89
AJ8
D
168 182Right-handed alpha
Helix 90
AJ9
D
184 196Right-handed alpha
Helix 91
AK1
D
202 209Right-handed alpha
Helix 92
AK2
D
239 251Right-handed alpha
Helix 93
AK3
D
260 283Right-handed alpha
Helix 94
AK4
D
287 300Right-handed alpha
Helix 95
AK5
D
306 320Right-handed alpha
Helix 96
AK6
D
329 355Right-handed alpha
Helix 97
AK7
D
355 361Right-handed alpha
Helix 98
AK8
D
375 390Right-handed alpha
Helix 99
AK9
D
393 414Right-handed alpha
Helix 100
AL1
D
414 419Right-handed alpha
Helix 101
AL2
D
421 431Right-handed alpha
Helix 102
AL3
D
437 447Right-handed alpha
Helix 103
AL4
D
448 461Right-handed alpha
Helix 104
AL5
D
468 488Right-handed alpha
Helix 105
AL6
D
489 502Right-handed alpha
Helix 106
AL7
E
5 9Right-handed 310
Helix 107
AL8
E
24 42Right-handed alpha
Helix 108
AL9
E
42 47Right-handed alpha
Helix 109
AM1
E
48 51Right-handed 310
Helix 110
AM2
E
65 91Right-handed alpha
Helix 111
AM3
E
92 97Right-handed alpha
Helix 112
AM4
E
102 116Right-handed alpha
Helix 113
AM5
E
125 141Right-handed alpha
Helix 114
AM6
E
142 146Right-handed 310
Helix 115
AM7
E
168 182Right-handed alpha
Helix 116
AM8
E
184 196Right-handed alpha
Helix 117
AM9
E
202 209Right-handed alpha
Helix 118
AN1
E
223 231Right-handed 310
Helix 119
AN2
E
239 251Right-handed alpha
Helix 120
AN3
E
260 283Right-handed alpha
Helix 121
AN4
E
287 300Right-handed alpha
Helix 122
AN5
E
306 320Right-handed alpha
Helix 123
AN6
E
328 355Right-handed alpha
Helix 124
AN7
E
355 361Right-handed alpha
Helix 125
AN8
E
373 390Right-handed alpha
Helix 126
AN9
E
393 414Right-handed alpha
Helix 127
AO1
E
414 419Right-handed alpha
Helix 128
AO2
E
421 431Right-handed alpha
Helix 129
AO3
E
437 446Right-handed alpha
Helix 130
AO4
E
448 461Right-handed alpha
Helix 131
AO5
E
468 488Right-handed alpha
Helix 132
AO6
E
489 502Right-handed alpha
Helix 133
AO7
F
5 9Right-handed 310
Helix 134
AO8
F
24 42Right-handed alpha
Helix 135
AO9
F
42 47Right-handed alpha
Helix 136
AP1
F
48 51Right-handed 310
Helix 137
AP2
F
65 91Right-handed alpha
Helix 138
AP3
F
92 97Right-handed alpha
Helix 139
AP4
F
102 116Right-handed alpha
Helix 140
AP5
F
125 141Right-handed alpha
Helix 141
AP6
F
142 146Right-handed 310
Helix 142
AP7
F
168 182Right-handed alpha
Helix 143
AP8
F
184 196Right-handed alpha
Helix 144
AP9
F
202 209Right-handed alpha
Helix 145
AQ1
F
223 231Right-handed 310
Helix 146
AQ2
F
239 251Right-handed alpha
Helix 147
AQ3
F
260 283Right-handed alpha
Helix 148
AQ4
F
287 300Right-handed alpha
Helix 149
AQ5
F
306 320Right-handed alpha
Helix 150
AQ6
F
327 355Right-handed alpha
Helix 151
AQ7
F
355 361Right-handed alpha
Helix 152
AQ8
F
373 390Right-handed alpha
Helix 153
AQ9
F
393 414Right-handed alpha
Helix 154
AR1
F
414 419Right-handed alpha
Helix 155
AR2
F
421 431Right-handed alpha
Helix 156
AR3
F
437 447Right-handed alpha
Helix 157
AR4
F
448 461Right-handed alpha
Helix 158
AR5
F
468 488Right-handed alpha
Helix 159
AR6
F
489 502Right-handed alpha
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There are 5 sheets in PDB entry 6OIV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 215first strand
Strand 2
A
233 235parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
214 215first strand
Strand 2
B
233 235parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
214 215first strand
Strand 2
C
233 235parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
214 215first strand
Strand 2
E
233 235parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
214 215first strand
Strand 2
F
233 235parallel
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