Analysis of interatomic Contacts of Structural Units in PDB entry:
6OJC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OJC entry

There is 1 chain in PDB entry 6OJC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1695GLY 1923
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 6OJC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1720 1730Right-handed 310
Helix 2
AA2
A
1752 1768Right-handed alpha
Helix 3
AA3
A
1779 1795Right-handed alpha
Helix 4
AA4
A
1823 1831Right-handed alpha
Helix 5
AA5
A
1836 1856Right-handed alpha
Helix 6
AA6
A
1872 1876Right-handed 310
Helix 7
AA7
A
1879 1883Right-handed 310
Helix 8
AA8
A
1900 1904Right-handed 310
Helix 9
AA9
A
1909 1922Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6OJC.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1698 1701first strand
Strand 2
A
1734 1738anti-parallel
Strand 3
A
1709 1713parallel
Strand 4
A
1773 1778parallel
Strand 5
A
1799 1805parallel
Strand 6
A
1865 1869parallel
Strand 7
A
1892 1896parallel
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