Analysis of interatomic Contacts of Structural Units in PDB entry:
6OK0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OK0 entry

There are 18 chains in PDB entry 6OK0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 9GLU 26
A
 ALA 28ASN 61
A
 ALA 63ARG 97
A
 ALA 99ASP 133
A
 ALA 135GLY 139
B
 ALA 9ARG 97
B
 ALA 99ASP 133
B
 ALA 135GLY 139
C
 ALA 9LEU 21
C
 LEU 23GLU 26
C
 ALA 28ASN 61
C
 ALA 63ARG 97
C
 ALA 99ASP 133
C
 ALA 135GLY 139
D
 ALA 8ASN 61
D
 ALA 63ARG 97
D
 ALA 99ASP 133
D
 ALA 135GLY 139
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6OK0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 31Right-handed alpha
Helix 2
AA2
A
32 46Right-handed alpha
Helix 3
AA3
A
52 65Right-handed alpha
Helix 4
AA4
A
68 82Right-handed alpha
Helix 5
AA5
A
88 101Right-handed alpha
Helix 6
AA6
A
104 118Right-handed alpha
Helix 7
AA7
A
124 138Right-handed alpha
Helix 8
AA8
B
20 30Right-handed alpha
Helix 9
AA9
B
32 46Right-handed alpha
Helix 10
AB1
B
52 65Right-handed alpha
Helix 11
AB2
B
68 82Right-handed alpha
Helix 12
AB3
B
88 102Right-handed alpha
Helix 13
AB4
B
104 118Right-handed alpha
Helix 14
AB5
B
124 137Right-handed alpha
Helix 15
AB6
C
20 31Right-handed alpha
Helix 16
AB7
C
32 46Right-handed alpha
Helix 17
AB8
C
52 65Right-handed alpha
Helix 18
AB9
C
68 82Right-handed alpha
Helix 19
AC1
C
88 101Right-handed alpha
Helix 20
AC2
C
104 118Right-handed alpha
Helix 21
AC3
C
124 139Right-handed alpha
Helix 22
AC4
D
20 30Right-handed alpha
Helix 23
AC5
D
32 46Right-handed alpha
Helix 24
AC6
D
52 65Right-handed alpha
Helix 25
AC7
D
68 82Right-handed alpha
Helix 26
AC8
D
88 103Right-handed alpha
Helix 27
AC9
D
104 118Right-handed alpha
Helix 28
AD1
D
124 137Right-handed alpha
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There are no sheets in PDB entry 6OK0
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il