Analysis of interatomic Contacts of Structural Units in PDB entry:
6OK2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6OK2 entry

There are 4 chains in PDB entry 6OK2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 0	SER 353
B	MET 1	SER 353
C	ALA 2	SER 353
D	PRO -4	THR 268

There are106 helices in PDB entry 6OK2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	0	14	Right-handed alpha
Helix 2	AA2	A	44	54	Right-handed alpha
Helix 3	AA3	A	57	68	Right-handed alpha
Helix 4	AA4	A	106	111	Right-handed alpha
Helix 5	AA5	A	113	120	Right-handed alpha
Helix 6	AA6	A	136	152	Right-handed alpha
Helix 7	AA7	A	185	193	Right-handed alpha
Helix 8	AA8	A	194	196	Right-handed 310
Helix 9	AA9	A	208	221	Right-handed alpha
Helix 10	AB1	A	233	244	Right-handed alpha
Helix 11	AB2	A	249	260	Right-handed alpha
Helix 12	AB3	A	288	297	Right-handed alpha
Helix 13	AB4	A	299	301	Right-handed 310
Helix 14	AB5	A	302	308	Right-handed alpha
Helix 15	AB6	A	310	315	Right-handed alpha
Helix 16	AB7	A	318	329	Right-handed alpha
Helix 17	AB8	A	333	339	Right-handed alpha
Helix 18	AB9	A	343	353	Right-handed alpha
Helix 19	AC1	B	3	14	Right-handed alpha
Helix 20	AC2	B	44	54	Right-handed alpha
Helix 21	AC3	B	57	68	Right-handed alpha
Helix 22	AC4	B	106	111	Right-handed alpha
Helix 23	AC5	B	113	120	Right-handed alpha
Helix 24	AC6	B	136	152	Right-handed alpha
Helix 25	AC7	B	185	192	Right-handed alpha
Helix 26	AC8	B	193	196	Right-handed 310
Helix 27	AC9	B	208	221	Right-handed alpha
Helix 28	AD1	B	233	244	Right-handed alpha
Helix 29	AD2	B	249	260	Right-handed alpha
Helix 30	AD3	B	288	297	Right-handed alpha
Helix 31	AD4	B	299	301	Right-handed 310
Helix 32	AD5	B	302	308	Right-handed alpha
Helix 33	AD6	B	310	315	Right-handed alpha
Helix 34	AD7	B	318	329	Right-handed alpha
Helix 35	AD8	B	333	341	Right-handed alpha
Helix 36	AD9	B	343	353	Right-handed alpha
Helix 37	AE1	C	3	14	Right-handed alpha
Helix 38	AE2	C	44	54	Right-handed alpha
Helix 39	AE3	C	57	68	Right-handed alpha
Helix 40	AE4	C	113	120	Right-handed alpha
Helix 41	AE5	C	136	152	Right-handed alpha
Helix 42	AE6	C	185	193	Right-handed alpha
Helix 43	AE7	C	194	197	Right-handed 310
Helix 44	AE8	C	208	221	Right-handed alpha
Helix 45	AE9	C	233	244	Right-handed alpha
Helix 46	AF1	C	246	248	Right-handed 310
Helix 47	AF2	C	249	260	Right-handed alpha
Helix 48	AF3	C	288	297	Right-handed alpha
Helix 49	AF4	C	299	301	Right-handed 310
Helix 50	AF5	C	302	310	Right-handed alpha
Helix 51	AF6	C	310	315	Right-handed alpha
Helix 52	AF7	C	318	329	Right-handed alpha
Helix 53	AF8	C	333	341	Right-handed alpha
Helix 54	AF9	C	343	353	Right-handed alpha
Helix 55	AG1	D	3	14	Right-handed alpha
Helix 56	AG2	D	44	54	Right-handed alpha
Helix 57	AG3	D	57	68	Right-handed alpha
Helix 58	AG4	D	106	111	Right-handed alpha
Helix 59	AG5	D	113	120	Right-handed alpha
Helix 60	AG6	D	136	152	Right-handed alpha
Helix 61	AG7	D	185	193	Right-handed alpha
Helix 62	AG8	D	194	197	Right-handed 310
Helix 63	AG9	D	208	221	Right-handed alpha
Helix 64	AH1	D	233	244	Right-handed alpha
Helix 65	AH2	D	249	260	Right-handed alpha
Helix 66	AH3	D	288	297	Right-handed alpha
Helix 67	AH4	D	299	301	Right-handed 310
Helix 68	AH5	D	302	309	Right-handed alpha
Helix 69	AH6	D	310	315	Right-handed alpha
Helix 70	AH7	D	318	329	Right-handed alpha
Helix 71	AH8	D	333	341	Right-handed alpha
Helix 72	AH9	D	343	352	Right-handed alpha
Helix 73	AI1	E	3	14	Right-handed alpha
Helix 74	AI2	E	44	54	Right-handed alpha
Helix 75	AI3	E	57	68	Right-handed alpha
Helix 76	AI4	E	113	120	Right-handed alpha
Helix 77	AI5	E	136	152	Right-handed alpha
Helix 78	AI6	E	185	193	Right-handed alpha
Helix 79	AI7	E	194	196	Right-handed 310
Helix 80	AI8	E	208	221	Right-handed alpha
Helix 81	AI9	E	233	244	Right-handed alpha
Helix 82	AJ1	E	249	260	Right-handed alpha
Helix 83	AJ2	E	288	297	Right-handed alpha
Helix 84	AJ3	E	301	310	Right-handed alpha
Helix 85	AJ4	E	310	315	Right-handed alpha
Helix 86	AJ5	E	318	329	Right-handed alpha
Helix 87	AJ6	E	333	341	Right-handed alpha
Helix 88	AJ7	E	343	353	Right-handed alpha
Helix 89	AJ8	F	3	14	Right-handed alpha
Helix 90	AJ9	F	44	54	Right-handed alpha
Helix 91	AK1	F	57	68	Right-handed alpha
Helix 92	AK2	F	106	111	Right-handed alpha
Helix 93	AK3	F	113	120	Right-handed alpha
Helix 94	AK4	F	136	152	Right-handed alpha
Helix 95	AK5	F	185	193	Right-handed alpha
Helix 96	AK6	F	194	196	Right-handed 310
Helix 97	AK7	F	208	221	Right-handed alpha
Helix 98	AK8	F	233	244	Right-handed alpha
Helix 99	AK9	F	249	260	Right-handed alpha
Helix 100	AL1	F	288	297	Right-handed alpha
Helix 101	AL2	F	299	301	Right-handed 310
Helix 102	AL3	F	302	308	Right-handed alpha
Helix 103	AL4	F	310	315	Right-handed alpha
Helix 104	AL5	F	318	329	Right-handed alpha
Helix 105	AL6	F	333	341	Right-handed alpha
Helix 106	AL7	F	343	351	Right-handed alpha

There are 12 sheets in PDB entry 6OK2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	34	37	first strand
Strand 2	A	28	31	anti-parallel
Strand 3	A	18	21	anti-parallel
Strand 4	A	92	100	anti-parallel
Strand 5	A	80	89	anti-parallel
Strand 6	A	70	76	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	173	178	first strand
Strand 2	A	155	160	parallel
Strand 3	A	200	205	parallel
Strand 4	A	224	229	parallel
Strand 5	A	125	130	parallel
Strand 6	A	261	271	parallel
Strand 7	A	278	285	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	34	37	first strand
Strand 2	B	28	31	anti-parallel
Strand 3	B	18	21	anti-parallel
Strand 4	B	92	100	anti-parallel
Strand 5	B	80	89	anti-parallel
Strand 6	B	69	76	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	173	178	first strand
Strand 2	B	155	160	parallel
Strand 3	B	200	205	parallel
Strand 4	B	224	229	parallel
Strand 5	B	125	130	parallel
Strand 6	B	261	271	parallel
Strand 7	B	278	285	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	34	37	first strand
Strand 2	C	28	31	anti-parallel
Strand 3	C	18	21	anti-parallel
Strand 4	C	92	99	anti-parallel
Strand 5	C	80	89	anti-parallel
Strand 6	C	69	76	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	173	178	first strand
Strand 2	C	155	160	parallel
Strand 3	C	200	205	parallel
Strand 4	C	224	229	parallel
Strand 5	C	125	130	parallel
Strand 6	C	261	271	parallel
Strand 7	C	278	285	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	34	37	first strand
Strand 2	D	28	31	anti-parallel
Strand 3	D	18	21	anti-parallel
Strand 4	D	92	100	anti-parallel
Strand 5	D	80	89	anti-parallel
Strand 6	D	69	76	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	173	178	first strand
Strand 2	D	155	160	parallel
Strand 3	D	200	205	parallel
Strand 4	D	224	229	parallel
Strand 5	D	125	130	parallel
Strand 6	D	261	271	parallel
Strand 7	D	278	285	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	34	37	first strand
Strand 2	E	28	31	anti-parallel
Strand 3	E	18	21	anti-parallel
Strand 4	E	92	100	anti-parallel
Strand 5	E	80	89	anti-parallel
Strand 6	E	69	76	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	173	178	first strand
Strand 2	E	155	160	parallel
Strand 3	E	200	205	parallel
Strand 4	E	224	229	parallel
Strand 5	E	125	130	parallel
Strand 6	E	261	271	parallel
Strand 7	E	278	285	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	34	37	first strand
Strand 2	F	28	31	anti-parallel
Strand 3	F	18	21	anti-parallel
Strand 4	F	92	100	anti-parallel
Strand 5	F	80	89	anti-parallel
Strand 6	F	69	76	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	173	178	first strand
Strand 2	F	155	160	parallel
Strand 3	F	200	205	parallel
Strand 4	F	224	228	parallel
Strand 5	F	125	130	parallel
Strand 6	F	261	271	parallel
Strand 7	F	278	285	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6OK2

Analysis of interatomic Contacts of Structural Units in PDB entry:
6OK2