Analysis of interatomic Contacts of Structural Units in PDB entry:
6OKU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6OKU entry

There are 7 chains in PDB entry 6OKU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 216	ILE 747
B	ASP 216	ILE 747
C	ASP 216	ILE 747
D	ASP 216	ILE 747
E	ASP 216	ILE 747
F	ASP 216	ILE 747
G	ASP 216	ILE 747

There are 63 helices in PDB entry 6OKU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	226	232	Right-handed alpha
Helix 2	AA2	A	272	278	Right-handed alpha
Helix 3	AA3	A	286	290	Right-handed 310
Helix 4	AA4	A	463	472	Right-handed alpha
Helix 5	AA5	A	503	505	Right-handed 310
Helix 6	AA6	A	506	513	Right-handed alpha
Helix 7	AA7	A	546	555	Right-handed alpha
Helix 8	AA8	A	581	593	Right-handed alpha
Helix 9	AA9	A	599	603	Right-handed 310
Helix 10	AB1	B	226	232	Right-handed alpha
Helix 11	AB2	B	272	278	Right-handed alpha
Helix 12	AB3	B	286	290	Right-handed 310
Helix 13	AB4	B	463	472	Right-handed alpha
Helix 14	AB5	B	503	505	Right-handed 310
Helix 15	AB6	B	506	513	Right-handed alpha
Helix 16	AB7	B	546	555	Right-handed alpha
Helix 17	AB8	B	581	593	Right-handed alpha
Helix 18	AB9	B	599	603	Right-handed 310
Helix 19	AC1	C	226	232	Right-handed alpha
Helix 20	AC2	C	272	278	Right-handed alpha
Helix 21	AC3	C	286	290	Right-handed 310
Helix 22	AC4	C	463	472	Right-handed alpha
Helix 23	AC5	C	503	505	Right-handed 310
Helix 24	AC6	C	506	513	Right-handed alpha
Helix 25	AC7	C	546	555	Right-handed alpha
Helix 26	AC8	C	581	593	Right-handed alpha
Helix 27	AC9	C	599	603	Right-handed 310
Helix 28	AD1	D	226	232	Right-handed alpha
Helix 29	AD2	D	272	278	Right-handed alpha
Helix 30	AD3	D	286	290	Right-handed 310
Helix 31	AD4	D	463	472	Right-handed alpha
Helix 32	AD5	D	503	505	Right-handed 310
Helix 33	AD6	D	506	513	Right-handed alpha
Helix 34	AD7	D	546	555	Right-handed alpha
Helix 35	AD8	D	581	593	Right-handed alpha
Helix 36	AD9	D	599	603	Right-handed 310
Helix 37	AE1	E	226	232	Right-handed alpha
Helix 38	AE2	E	272	278	Right-handed alpha
Helix 39	AE3	E	286	290	Right-handed 310
Helix 40	AE4	E	463	472	Right-handed alpha
Helix 41	AE5	E	503	505	Right-handed 310
Helix 42	AE6	E	506	513	Right-handed alpha
Helix 43	AE7	E	546	555	Right-handed alpha
Helix 44	AE8	E	581	593	Right-handed alpha
Helix 45	AE9	E	599	603	Right-handed 310
Helix 46	AF1	F	226	232	Right-handed alpha
Helix 47	AF2	F	272	278	Right-handed alpha
Helix 48	AF3	F	286	290	Right-handed 310
Helix 49	AF4	F	463	472	Right-handed alpha
Helix 50	AF5	F	503	505	Right-handed 310
Helix 51	AF6	F	506	513	Right-handed alpha
Helix 52	AF7	F	546	555	Right-handed alpha
Helix 53	AF8	F	581	593	Right-handed alpha
Helix 54	AF9	F	599	603	Right-handed 310
Helix 55	AG1	G	226	232	Right-handed alpha
Helix 56	AG2	G	272	278	Right-handed alpha
Helix 57	AG3	G	286	290	Right-handed 310
Helix 58	AG4	G	463	472	Right-handed alpha
Helix 59	AG5	G	503	505	Right-handed 310
Helix 60	AG6	G	506	513	Right-handed alpha
Helix 61	AG7	G	546	555	Right-handed alpha
Helix 62	AG8	G	581	593	Right-handed alpha
Helix 63	AG9	G	599	603	Right-handed 310

There are 64 sheets in PDB entry 6OKU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2, AG3, AG4, AG5, AG6, AG7, AG8, AG9, AH1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	235	238	first strand
Strand 2	A	241	244	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	299	311	first strand
Strand 2	A	387	398	anti-parallel
Strand 3	A	438	439	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	299	311	first strand
Strand 2	A	387	398	anti-parallel
Strand 3	A	447	449	anti-parallel

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There are 15 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	314	326	first strand
Strand 2	A	368	382	anti-parallel
Strand 3	B	314	326	anti-parallel
Strand 4	B	368	382	anti-parallel
Strand 5	C	314	326	anti-parallel
Strand 6	C	368	382	anti-parallel
Strand 7	D	314	326	anti-parallel
Strand 8	D	368	382	anti-parallel
Strand 9	E	314	326	anti-parallel
Strand 10	E	368	382	anti-parallel
Strand 11	F	314	326	anti-parallel
Strand 12	F	368	382	anti-parallel
Strand 13	G	314	326	anti-parallel
Strand 14	G	368	382	anti-parallel
Strand 15	A	314	326	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	418	423	first strand
Strand 2	A	404	413	anti-parallel
Strand 3	A	482	486	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	489	490	first strand
Strand 2	A	496	497	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	525	531	first strand
Strand 2	A	514	520	anti-parallel
Strand 3	A	610	614	parallel
Strand 4	A	577	580	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	558	560	first strand
Strand 2	A	563	566	anti-parallel
Strand 3	A	569	571	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	618	619	first strand
Strand 2	A	736	739	anti-parallel
Strand 3	A	668	673	anti-parallel
Strand 4	A	707	712	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	651	659	first strand
Strand 2	A	720	728	anti-parallel
Strand 3	A	680	685	anti-parallel
Strand 4	A	695	696	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	235	238	first strand
Strand 2	B	241	244	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	299	311	first strand
Strand 2	B	387	398	anti-parallel
Strand 3	B	438	439	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	299	311	first strand
Strand 2	B	387	398	anti-parallel
Strand 3	B	447	449	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	418	423	first strand
Strand 2	B	404	413	anti-parallel
Strand 3	B	482	486	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	489	490	first strand
Strand 2	B	496	497	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	525	531	first strand
Strand 2	B	514	520	anti-parallel
Strand 3	B	610	614	parallel
Strand 4	B	577	580	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	558	560	first strand
Strand 2	B	563	566	anti-parallel
Strand 3	B	569	571	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	618	619	first strand
Strand 2	B	736	739	anti-parallel
Strand 3	B	668	673	anti-parallel
Strand 4	B	707	712	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	651	659	first strand
Strand 2	B	720	728	anti-parallel
Strand 3	B	680	685	anti-parallel
Strand 4	B	695	696	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	235	238	first strand
Strand 2	C	241	244	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	299	311	first strand
Strand 2	C	387	398	anti-parallel
Strand 3	C	438	439	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	299	311	first strand
Strand 2	C	387	398	anti-parallel
Strand 3	C	447	449	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	418	423	first strand
Strand 2	C	404	413	anti-parallel
Strand 3	C	482	486	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	489	490	first strand
Strand 2	C	496	497	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	525	531	first strand
Strand 2	C	514	520	anti-parallel
Strand 3	C	610	614	parallel
Strand 4	C	577	580	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	558	560	first strand
Strand 2	C	563	566	anti-parallel
Strand 3	C	569	571	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	618	619	first strand
Strand 2	C	736	739	anti-parallel
Strand 3	C	668	673	anti-parallel
Strand 4	C	707	712	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	651	659	first strand
Strand 2	C	720	728	anti-parallel
Strand 3	C	680	685	anti-parallel
Strand 4	C	695	696	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	235	238	first strand
Strand 2	D	241	244	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	299	311	first strand
Strand 2	D	387	398	anti-parallel
Strand 3	D	438	439	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	299	311	first strand
Strand 2	D	387	398	anti-parallel
Strand 3	D	447	449	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	418	423	first strand
Strand 2	D	404	413	anti-parallel
Strand 3	D	482	486	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	489	490	first strand
Strand 2	D	496	497	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	525	531	first strand
Strand 2	D	514	520	anti-parallel
Strand 3	D	610	614	parallel
Strand 4	D	577	580	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	558	560	first strand
Strand 2	D	563	566	anti-parallel
Strand 3	D	569	571	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	618	619	first strand
Strand 2	D	736	739	anti-parallel
Strand 3	D	668	673	anti-parallel
Strand 4	D	707	712	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	651	659	first strand
Strand 2	D	720	728	anti-parallel
Strand 3	D	680	685	anti-parallel
Strand 4	D	695	696	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	235	238	first strand
Strand 2	E	241	244	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	299	311	first strand
Strand 2	E	387	398	anti-parallel
Strand 3	E	438	439	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	299	311	first strand
Strand 2	E	387	398	anti-parallel
Strand 3	E	447	449	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	418	423	first strand
Strand 2	E	404	413	anti-parallel
Strand 3	E	482	486	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	489	490	first strand
Strand 2	E	496	497	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	525	531	first strand
Strand 2	E	514	520	anti-parallel
Strand 3	E	610	614	parallel
Strand 4	E	577	580	anti-parallel

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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	558	560	first strand
Strand 2	E	563	566	anti-parallel
Strand 3	E	569	571	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	618	619	first strand
Strand 2	E	736	739	anti-parallel
Strand 3	E	668	673	anti-parallel
Strand 4	E	707	712	anti-parallel

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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	651	659	first strand
Strand 2	E	720	728	anti-parallel
Strand 3	E	680	685	anti-parallel
Strand 4	E	695	696	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	235	238	first strand
Strand 2	F	241	244	anti-parallel

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There are 3 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	299	311	first strand
Strand 2	F	387	398	anti-parallel
Strand 3	F	438	439	anti-parallel

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There are 3 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	299	311	first strand
Strand 2	F	387	398	anti-parallel
Strand 3	F	447	449	anti-parallel

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There are 3 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	418	423	first strand
Strand 2	F	404	413	anti-parallel
Strand 3	F	482	486	anti-parallel

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There are 2 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	489	490	first strand
Strand 2	F	496	497	anti-parallel

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There are 4 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	525	531	first strand
Strand 2	F	514	520	anti-parallel
Strand 3	F	610	614	parallel
Strand 4	F	577	580	anti-parallel

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There are 3 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	558	560	first strand
Strand 2	F	563	566	anti-parallel
Strand 3	F	569	571	anti-parallel

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There are 4 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	618	619	first strand
Strand 2	F	736	739	anti-parallel
Strand 3	F	668	673	anti-parallel
Strand 4	F	707	712	anti-parallel

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There are 4 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	651	659	first strand
Strand 2	F	720	728	anti-parallel
Strand 3	F	680	685	anti-parallel
Strand 4	F	695	696	anti-parallel

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There are 2 strands in AG2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	235	238	first strand
Strand 2	G	241	244	anti-parallel

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There are 3 strands in AG3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	299	311	first strand
Strand 2	G	387	398	anti-parallel
Strand 3	G	438	439	anti-parallel

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There are 3 strands in AG4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	299	311	first strand
Strand 2	G	387	398	anti-parallel
Strand 3	G	447	449	anti-parallel

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There are 3 strands in AG5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	418	423	first strand
Strand 2	G	404	413	anti-parallel
Strand 3	G	482	486	anti-parallel

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There are 2 strands in AG6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	489	490	first strand
Strand 2	G	496	497	anti-parallel

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There are 4 strands in AG7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	525	531	first strand
Strand 2	G	514	520	anti-parallel
Strand 3	G	610	614	parallel
Strand 4	G	577	580	anti-parallel

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There are 3 strands in AG8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	558	560	first strand
Strand 2	G	563	566	anti-parallel
Strand 3	G	569	571	anti-parallel

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There are 4 strands in AG9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	618	619	first strand
Strand 2	G	736	739	anti-parallel
Strand 3	G	668	673	anti-parallel
Strand 4	G	707	712	anti-parallel

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There are 4 strands in AH1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	651	659	first strand
Strand 2	G	720	728	anti-parallel
Strand 3	G	680	685	anti-parallel
Strand 4	G	695	696	anti-parallel

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Analysis of interatomic Contacts of Structural Units in PDB entry: 6OKU

Analysis of interatomic Contacts of Structural Units in PDB entry:
6OKU