Analysis of interatomic Contacts of Structural Units in PDB entry:
6OMF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6OMF entry

There are 9 chains in PDB entry 6OMF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 5	LEU 237
B	GLY 3	ASP 233
C	VAL 2	ASP 1341
D	GLU 16	ALA 1375
E	ALA 2	LEU 80
F	GLN 52	ARG 329
J	SER 5	LEU 131
T	T 1	C 52
N	G 1	A 52

There are118 helices in PDB entry 6OMF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	34	50	Right-handed alpha
Helix 2	AA2	A	77	87	Right-handed alpha
Helix 3	AA3	A	113	115	Right-handed 310
Helix 4	AA4	A	154	159	Right-handed alpha
Helix 5	AA5	A	212	229	Right-handed alpha
Helix 6	AA6	B	34	49	Right-handed alpha
Helix 7	AA7	B	77	87	Right-handed alpha
Helix 8	AA8	B	113	115	Right-handed 310
Helix 9	AA9	B	212	228	Right-handed alpha
Helix 10	AB1	C	28	39	Right-handed alpha
Helix 11	AB2	C	48	57	Right-handed alpha
Helix 12	AB3	C	81	89	Right-handed alpha
Helix 13	AB4	C	206	213	Right-handed alpha
Helix 14	AB5	C	216	225	Right-handed alpha
Helix 15	AB6	C	242	247	Right-handed 310
Helix 16	AB7	C	270	281	Right-handed alpha
Helix 17	AB8	C	290	294	Right-handed 310
Helix 18	AB9	C	318	329	Right-handed alpha
Helix 19	AC1	C	345	354	Right-handed alpha
Helix 20	AC2	C	358	371	Right-handed alpha
Helix 21	AC3	C	377	390	Right-handed alpha
Helix 22	AC4	C	398	409	Right-handed alpha
Helix 23	AC5	C	421	438	Right-handed alpha
Helix 24	AC6	C	455	481	Right-handed alpha
Helix 25	AC7	C	494	508	Right-handed alpha
Helix 26	AC8	C	520	528	Right-handed alpha
Helix 27	AC9	C	607	612	Right-handed alpha
Helix 28	AD1	C	675	686	Right-handed alpha
Helix 29	AD2	C	687	689	Right-handed 310
Helix 30	AD3	C	703	711	Right-handed alpha
Helix 31	AD4	C	820	826	Right-handed alpha
Helix 32	AD5	C	858	863	Right-handed alpha
Helix 33	AD6	C	896	906	Right-handed alpha
Helix 34	AD7	C	942	979	Right-handed alpha
Helix 35	AD8	C	987	992	Right-handed alpha
Helix 36	AD9	C	996	1000	Right-handed 310
Helix 37	AE1	C	1007	1038	Right-handed alpha
Helix 38	AE2	C	1101	1107	Right-handed alpha
Helix 39	AE3	C	1109	1134	Right-handed alpha
Helix 40	AE4	C	1137	1151	Right-handed alpha
Helix 41	AE5	C	1160	1164	Right-handed 310
Helix 42	AE6	C	1167	1177	Right-handed alpha
Helix 43	AE7	C	1191	1202	Right-handed alpha
Helix 44	AE8	C	1238	1243	Right-handed alpha
Helix 45	AE9	C	1271	1281	Right-handed alpha
Helix 46	AF1	C	1284	1293	Right-handed alpha
Helix 47	AF2	C	1297	1309	Right-handed alpha
Helix 48	AF3	C	1320	1331	Right-handed alpha
Helix 49	AF4	D	29	33	Right-handed alpha
Helix 50	AF5	D	94	100	Right-handed 310
Helix 51	AF6	D	114	119	Right-handed alpha
Helix 52	AF7	D	122	129	Right-handed alpha
Helix 53	AF8	D	131	140	Right-handed alpha
Helix 54	AF9	D	161	172	Right-handed alpha
Helix 55	AG1	D	181	192	Right-handed alpha
Helix 56	AG2	D	194	208	Right-handed alpha
Helix 57	AG3	D	210	230	Right-handed alpha
Helix 58	AG4	D	233	236	Right-handed 310
Helix 59	AG5	D	246	250	Right-handed 310
Helix 60	AG6	D	264	285	Right-handed alpha
Helix 61	AG7	D	288	307	Right-handed alpha
Helix 62	AG8	D	327	331	Right-handed 310
Helix 63	AG9	D	371	377	Right-handed alpha
Helix 64	AH1	D	377	386	Right-handed alpha
Helix 65	AH2	D	393	404	Right-handed alpha
Helix 66	AH3	D	407	416	Right-handed alpha
Helix 67	AH4	D	430	432	Right-handed 310
Helix 68	AH5	D	450	452	Right-handed 310
Helix 69	AH6	D	453	458	Right-handed alpha
Helix 70	AH7	D	473	483	Right-handed alpha
Helix 71	AH8	D	505	514	Right-handed alpha
Helix 72	AH9	D	531	539	Right-handed alpha
Helix 73	AI1	D	574	580	Right-handed alpha
Helix 74	AI2	D	588	592	Right-handed 310
Helix 75	AI3	D	598	603	Right-handed alpha
Helix 76	AI4	D	606	612	Right-handed alpha
Helix 77	AI5	D	614	634	Right-handed alpha
Helix 78	AI6	D	640	644	Right-handed 310
Helix 79	AI7	D	649	670	Right-handed alpha
Helix 80	AI8	D	674	702	Right-handed alpha
Helix 81	AI9	D	768	775	Right-handed alpha
Helix 82	AJ1	D	776	804	Right-handed alpha
Helix 83	AJ2	D	834	839	Right-handed alpha
Helix 84	AJ3	D	865	876	Right-handed alpha
Helix 85	AJ4	D	896	900	Right-handed alpha
Helix 86	AJ5	D	914	925	Right-handed alpha
Helix 87	AJ6	D	926	930	Right-handed 310
Helix 88	AJ7	D	1137	1145	Right-handed alpha
Helix 89	AJ8	D	1216	1225	Right-handed alpha
Helix 90	AJ9	D	1225	1242	Right-handed alpha
Helix 91	AK1	D	1250	1261	Right-handed alpha
Helix 92	AK2	D	1281	1295	Right-handed alpha
Helix 93	AK3	D	1318	1324	Right-handed alpha
Helix 94	AK4	D	1327	1339	Right-handed alpha
Helix 95	AK5	D	1347	1354	Right-handed alpha
Helix 96	AK6	D	1361	1373	Right-handed alpha
Helix 97	AK7	E	6	13	Right-handed alpha
Helix 98	AK8	E	17	32	Right-handed alpha
Helix 99	AK9	E	45	56	Right-handed alpha
Helix 100	AL1	E	60	77	Right-handed alpha
Helix 101	AL2	F	56	65	Right-handed alpha
Helix 102	AL3	F	72	84	Right-handed alpha
Helix 103	AL4	F	87	98	Right-handed alpha
Helix 104	AL5	F	98	109	Right-handed alpha
Helix 105	AL6	F	115	133	Right-handed alpha
Helix 106	AL7	F	141	161	Right-handed alpha
Helix 107	AL8	F	168	190	Right-handed alpha
Helix 108	AL9	F	194	203	Right-handed alpha
Helix 109	AM1	F	205	215	Right-handed alpha
Helix 110	AM2	F	233	238	Right-handed alpha
Helix 111	AM3	F	245	266	Right-handed alpha
Helix 112	AM4	F	267	279	Right-handed alpha
Helix 113	AM5	F	287	295	Right-handed alpha
Helix 114	AM6	F	298	320	Right-handed alpha
Helix 115	AM7	F	323	329	Right-handed alpha
Helix 116	AM8	J	10	20	Right-handed alpha
Helix 117	AM9	J	89	114	Right-handed alpha
Helix 118	AN1	J	123	127	Right-handed 310

There are 54 sheets in PDB entry 6OMF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	13	14	first strand
Strand 2	A	26	31	anti-parallel
Strand 3	A	199	203	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	52	53	first strand
Strand 2	A	149	153	anti-parallel
Strand 3	A	175	177	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	97	105	first strand
Strand 2	A	139	147	anti-parallel
Strand 3	A	56	61	anti-parallel
Strand 4	A	171	172	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	92	first strand
Strand 2	A	121	123	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	111	first strand
Strand 2	A	129	133	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	15	16	first strand
Strand 2	B	23	31	anti-parallel
Strand 3	B	198	207	anti-parallel
Strand 4	B	180	184	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	15	16	first strand
Strand 2	B	23	31	anti-parallel
Strand 3	B	198	207	anti-parallel
Strand 4	B	187	190	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	99	101	first strand
Strand 2	B	142	153	anti-parallel
Strand 3	B	50	61	anti-parallel
Strand 4	B	171	172	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	99	101	first strand
Strand 2	B	142	153	anti-parallel
Strand 3	B	175	176	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	92	first strand
Strand 2	B	121	123	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	104	105	first strand
Strand 2	B	139	140	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	109	111	first strand
Strand 2	B	129	132	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	14	first strand
Strand 2	C	1182	1183	parallel
Strand 3	C	700	701	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	60	first strand
Strand 2	C	66	72	anti-parallel
Strand 3	C	93	105	anti-parallel
Strand 4	C	114	128	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	143	145	first strand
Strand 2	C	512	514	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	147	148	first strand
Strand 2	C	530	531	parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	154	155	first strand
Strand 2	C	173	177	anti-parallel
Strand 3	C	185	188	anti-parallel
Strand 4	C	194	197	anti-parallel
Strand 5	C	204	205	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	230	231	first strand
Strand 2	C	238	240	anti-parallel
Strand 3	C	284	285	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	255	257	first strand
Strand 2	C	260	263	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	301	302	first strand
Strand 2	C	309	311	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	599	606	first strand
Strand 2	C	589	594	anti-parallel
Strand 3	C	652	654	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	616	617	first strand
Strand 2	C	633	637	anti-parallel
Strand 3	C	642	646	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	716	717	first strand
Strand 2	C	782	785	anti-parallel
Strand 3	C	768	769	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	748	752	first strand
Strand 2	C	731	736	anti-parallel
Strand 3	C	722	727	anti-parallel
Strand 4	C	776	777	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	757	758	first strand
Strand 2	C	764	765	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	789	790	first strand
Strand 2	C	793	794	anti-parallel

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There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	816	819	first strand
Strand 2	C	1073	1080	parallel
Strand 3	C	1065	1067	anti-parallel
Strand 4	C	1225	1234	anti-parallel
Strand 5	C	798	804	anti-parallel
Strand 6	C	1096	1098	parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	816	819	first strand
Strand 2	C	1073	1080	parallel
Strand 3	C	1065	1067	anti-parallel
Strand 4	C	1225	1234	anti-parallel
Strand 5	C	1209	1210	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	846	847	first strand
Strand 2	C	831	843	anti-parallel
Strand 3	C	1046	1057	anti-parallel
Strand 4	C	930	935	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	882	884	first strand
Strand 2	C	918	919	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	887	889	first strand
Strand 2	C	913	915	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1087	1088	first strand
Strand 2	C	1212	1213	anti-parallel

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There are 6 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1244	1246	first strand
Strand 2	D	350	356	anti-parallel
Strand 3	D	465	469	anti-parallel
Strand 4	D	421	425	anti-parallel
Strand 5	D	434	442	anti-parallel
Strand 6	D	365	369	parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1244	1246	first strand
Strand 2	D	350	356	anti-parallel
Strand 3	D	447	448	parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1269	1270	first strand
Strand 2	D	345	346	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1335	1340	first strand
Strand 2	D	19	24	anti-parallel
Strand 3	D	1341	1342	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	34	37	first strand
Strand 2	D	102	112	parallel
Strand 3	D	238	244	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	159	160	first strand
Strand 2	D	144	146	anti-parallel
Strand 3	D	178	179	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	254	255	first strand
Strand 2	D	259	262	anti-parallel
Strand 3	F	220	221	parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	526	527	first strand
Strand 2	D	547	550	parallel
Strand 3	D	570	573	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	553	556	first strand
Strand 2	D	564	567	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	706	707	first strand
Strand 2	D	714	715	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	809	811	first strand
Strand 2	D	894	895	parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	821	822	first strand
Strand 2	D	880	881	anti-parallel

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There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	949	951	first strand
Strand 2	D	1016	1019	anti-parallel
Strand 3	D	1002	1003	anti-parallel

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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	991	996	first strand
Strand 2	D	981	985	anti-parallel
Strand 3	D	956	961	anti-parallel
Strand 4	D	1010	1011	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	965	967	first strand
Strand 2	D	973	975	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1025	1026	first strand
Strand 2	D	1123	1124	anti-parallel

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There are 4 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1087	1088	first strand
Strand 2	D	1080	1081	anti-parallel
Strand 3	D	1033	1035	anti-parallel
Strand 4	D	1114	1115	anti-parallel

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There are 3 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1046	1048	first strand
Strand 2	D	1059	1061	anti-parallel
Strand 3	D	1106	1107	anti-parallel

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There are 4 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1189	1191	first strand
Strand 2	D	1172	1178	anti-parallel
Strand 3	D	1161	1168	anti-parallel
Strand 4	D	1203	1204	anti-parallel

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There are 2 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1266	1268	first strand
Strand 2	D	1301	1302	anti-parallel

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There are 4 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	34	41	first strand
Strand 2	J	53	62	anti-parallel
Strand 3	J	75	76	anti-parallel
Strand 4	J	82	83	anti-parallel

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There are 4 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	34	41	first strand
Strand 2	J	53	62	anti-parallel
Strand 3	J	66	70	anti-parallel
Strand 4	J	117	120	parallel

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Analysis of interatomic Contacts of Structural Units in PDB entry: 6OMF

Analysis of interatomic Contacts of Structural Units in PDB entry:
6OMF