Analysis of interatomic Contacts of Structural Units in PDB entry:
6OO5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OO5 entry

There are 4 chains in PDB entry 6OO5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 73SER 726
B
 PHE 73SER 726
C
 PHE 73SER 726
D
 PHE 73SER 726
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are102 helices in PDB entry 6OO5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
74 85Right-handed alpha
Helix 2
AA2
A
92 101Right-handed alpha
Helix 3
AA3
A
117 125Right-handed alpha
Helix 4
AA4
A
133 145Right-handed alpha
Helix 5
AA5
A
164 172Right-handed alpha
Helix 6
AA6
A
174 184Right-handed alpha
Helix 7
AA7
A
210 218Right-handed alpha
Helix 8
AA8
A
220 229Right-handed alpha
Helix 9
AA9
A
246 255Right-handed alpha
Helix 10
AB1
A
259 280Right-handed alpha
Helix 11
AB2
A
284 288Right-handed 310
Helix 12
AB3
A
295 303Right-handed alpha
Helix 13
AB4
A
306 314Right-handed alpha
Helix 14
AB5
A
318 322Right-handed 310
Helix 15
AB6
A
353 360Right-handed alpha
Helix 16
AB7
A
373 387Right-handed alpha
Helix 17
AB8
A
387 411Right-handed alpha
Helix 18
AB9
A
428 457Right-handed alpha
Helix 19
AC1
A
468 491Right-handed alpha
Helix 20
AC2
A
494 509Right-handed alpha
Helix 21
AC3
A
510 516Right-handed 310
Helix 22
AC4
A
517 557Right-handed alpha
Helix 23
AC5
A
590 604Right-handed alpha
Helix 24
AC6
A
617 648Right-handed alpha
Helix 25
AC7
A
652 672Right-handed alpha
Helix 26
AC8
B
74 85Right-handed alpha
Helix 27
AC9
B
92 101Right-handed alpha
Helix 28
AD1
B
117 125Right-handed alpha
Helix 29
AD2
B
133 144Right-handed alpha
Helix 30
AD3
B
164 172Right-handed alpha
Helix 31
AD4
B
174 185Right-handed alpha
Helix 32
AD5
B
210 218Right-handed alpha
Helix 33
AD6
B
220 230Right-handed alpha
Helix 34
AD7
B
246 255Right-handed alpha
Helix 35
AD8
B
258 280Right-handed alpha
Helix 36
AD9
B
284 288Right-handed 310
Helix 37
AE1
B
295 303Right-handed alpha
Helix 38
AE2
B
306 314Right-handed alpha
Helix 39
AE3
B
353 361Right-handed alpha
Helix 40
AE4
B
366 370Right-handed 310
Helix 41
AE5
B
373 387Right-handed alpha
Helix 42
AE6
B
387 411Right-handed alpha
Helix 43
AE7
B
428 457Right-handed alpha
Helix 44
AE8
B
468 491Right-handed alpha
Helix 45
AE9
B
494 509Right-handed alpha
Helix 46
AF1
B
510 516Right-handed 310
Helix 47
AF2
B
517 534Right-handed alpha
Helix 48
AF3
B
534 557Right-handed alpha
Helix 49
AF4
B
590 604Right-handed alpha
Helix 50
AF5
B
617 648Right-handed alpha
Helix 51
AF6
B
653 672Right-handed alpha
Helix 52
AF7
C
74 85Right-handed alpha
Helix 53
AF8
C
92 101Right-handed alpha
Helix 54
AF9
C
117 125Right-handed alpha
Helix 55
AG1
C
133 145Right-handed alpha
Helix 56
AG2
C
164 172Right-handed alpha
Helix 57
AG3
C
174 184Right-handed alpha
Helix 58
AG4
C
210 218Right-handed alpha
Helix 59
AG5
C
220 229Right-handed alpha
Helix 60
AG6
C
246 255Right-handed alpha
Helix 61
AG7
C
259 280Right-handed alpha
Helix 62
AG8
C
284 288Right-handed 310
Helix 63
AG9
C
295 303Right-handed alpha
Helix 64
AH1
C
306 314Right-handed alpha
Helix 65
AH2
C
318 322Right-handed 310
Helix 66
AH3
C
353 360Right-handed alpha
Helix 67
AH4
C
373 387Right-handed alpha
Helix 68
AH5
C
387 411Right-handed alpha
Helix 69
AH6
C
428 457Right-handed alpha
Helix 70
AH7
C
468 491Right-handed alpha
Helix 71
AH8
C
494 509Right-handed alpha
Helix 72
AH9
C
510 516Right-handed 310
Helix 73
AI1
C
517 557Right-handed alpha
Helix 74
AI2
C
590 604Right-handed alpha
Helix 75
AI3
C
617 648Right-handed alpha
Helix 76
AI4
C
652 672Right-handed alpha
Helix 77
AI5
D
74 85Right-handed alpha
Helix 78
AI6
D
92 101Right-handed alpha
Helix 79
AI7
D
117 125Right-handed alpha
Helix 80
AI8
D
133 144Right-handed alpha
Helix 81
AI9
D
164 172Right-handed alpha
Helix 82
AJ1
D
174 185Right-handed alpha
Helix 83
AJ2
D
210 218Right-handed alpha
Helix 84
AJ3
D
220 230Right-handed alpha
Helix 85
AJ4
D
246 255Right-handed alpha
Helix 86
AJ5
D
258 280Right-handed alpha
Helix 87
AJ6
D
284 288Right-handed 310
Helix 88
AJ7
D
295 303Right-handed alpha
Helix 89
AJ8
D
306 314Right-handed alpha
Helix 90
AJ9
D
353 361Right-handed alpha
Helix 91
AK1
D
366 370Right-handed 310
Helix 92
AK2
D
373 387Right-handed alpha
Helix 93
AK3
D
387 411Right-handed alpha
Helix 94
AK4
D
428 457Right-handed alpha
Helix 95
AK5
D
468 491Right-handed alpha
Helix 96
AK6
D
494 509Right-handed alpha
Helix 97
AK7
D
510 516Right-handed 310
Helix 98
AK8
D
517 534Right-handed alpha
Helix 99
AK9
D
534 557Right-handed alpha
Helix 100
AL1
D
590 604Right-handed alpha
Helix 101
AL2
D
617 648Right-handed alpha
Helix 102
AL3
D
653 672Right-handed alpha
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There are 4 sheets in PDB entry 6OO5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
328 333first strand
Strand 2
A
336 342anti-parallel
Strand 3
A
697 708anti-parallel
Strand 4
A
685 691anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
327 333first strand
Strand 2
B
336 342anti-parallel
Strand 3
B
697 708anti-parallel
Strand 4
B
685 691anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
328 333first strand
Strand 2
C
336 342anti-parallel
Strand 3
C
697 708anti-parallel
Strand 4
C
685 691anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
327 333first strand
Strand 2
D
336 342anti-parallel
Strand 3
D
697 708anti-parallel
Strand 4
D
685 691anti-parallel
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