Analysis of interatomic Contacts of Structural Units in PDB entry:
6OOD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OOD entry

There is 1 chain in PDB entry 6OOD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 36GLY 190
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 6OOD. Click on helix number for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
154 157Right-handed 310
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There is 1 sheet (AA1) in PDB entry 6OOD.

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 63first strand
Strand 2
A
78 86anti-parallel
Strand 3
A
95 105anti-parallel
Strand 4
A
113 121anti-parallel
Strand 5
A
130 137anti-parallel
Strand 6
A
145 153anti-parallel
Strand 7
A
160 170anti-parallel
Strand 8
A
177 187anti-parallel
Strand 9
A
40 50anti-parallel
Strand 10
A
78 86anti-parallel
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