Analysis of interatomic Contacts of Structural Units in PDB entry:
6OOG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OOG entry

There is 1 chain in PDB entry 6OOG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO -1ARG 250
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6OOG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 30Right-handed alpha
Helix 2
AA2
A
43 45Right-handed 310
Helix 3
AA3
A
46 54Right-handed alpha
Helix 4
AA4
A
78 85Right-handed alpha
Helix 5
AA5
A
94 100Right-handed alpha
Helix 6
AA6
A
104 118Right-handed alpha
Helix 7
AA7
A
129 135Right-handed alpha
Helix 8
AA8
A
137 151Right-handed alpha
Helix 9
AA9
A
156 162Right-handed 310
Helix 10
AB1
A
168 172Right-handed 310
Helix 11
AB2
A
179 198Right-handed alpha
Helix 12
AB3
A
199 206Right-handed alpha
Helix 13
AB4
A
218 224Right-handed alpha
Helix 14
AB5
A
234 239Right-handed 310
Helix 15
AB6
A
240 247Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6OOG.

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 10first strand
Strand 2
A
37 42parallel
Strand 3
A
58 62parallel
Strand 4
A
89 92parallel
Strand 5
A
121 126parallel
Strand 6
A
164 166parallel
Strand 7
A
208 211parallel
Strand 8
A
230 233parallel
Strand 9
A
6 10parallel
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