Analysis of interatomic Contacts of Structural Units in PDB entry:
6OOP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OOP entry

There is 1 chain in PDB entry 6OOP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 9LYS 400
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 18 helices in PDB entry 6OOP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 35Right-handed alpha
Helix 2
AA2
A
35 48Right-handed alpha
Helix 3
AA3
A
52 66Right-handed alpha
Helix 4
AA4
A
68 80Right-handed alpha
Helix 5
AA5
A
80 99Right-handed alpha
Helix 6
AA6
A
100 102Right-handed 310
Helix 7
AA7
A
104 117Right-handed alpha
Helix 8
AA8
A
119 125Right-handed alpha
Helix 9
AA9
A
125 134Right-handed alpha
Helix 10
AB1
A
135 165Right-handed alpha
Helix 11
AB2
A
169 192Right-handed alpha
Helix 12
AB3
A
204 218Right-handed alpha
Helix 13
AB4
A
218 247Right-handed alpha
Helix 14
AB5
A
253 279Right-handed alpha
Helix 15
AB6
A
280 282Right-handed 310
Helix 16
AB7
A
283 309Right-handed alpha
Helix 17
AB8
A
312 340Right-handed alpha
Helix 18
AB9
A
345 400Right-handed alpha
Back to top of page
There are no sheets in PDB entry 6OOP
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il