Analysis of interatomic Contacts of Structural Units in PDB entry:
6OOQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OOQ entry

There is 1 chain in PDB entry 6OOQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 9LYS 400
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 20 helices in PDB entry 6OOQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 35Right-handed alpha
Helix 2
AA2
A
35 48Right-handed alpha
Helix 3
AA3
A
50 54Right-handed 310
Helix 4
AA4
A
55 79Right-handed alpha
Helix 5
AA5
A
81 98Right-handed alpha
Helix 6
AA6
A
99 102Right-handed 310
Helix 7
AA7
A
104 106Right-handed 310
Helix 8
AA8
A
107 115Right-handed alpha
Helix 9
AA9
A
116 118Right-handed 310
Helix 10
AB1
A
119 125Right-handed alpha
Helix 11
AB2
A
135 168Right-handed alpha
Helix 12
AB3
A
170 186Right-handed alpha
Helix 13
AB4
A
209 214Right-handed alpha
Helix 14
AB5
A
220 247Right-handed alpha
Helix 15
AB6
A
253 279Right-handed alpha
Helix 16
AB7
A
283 292Right-handed alpha
Helix 17
AB8
A
293 306Right-handed alpha
Helix 18
AB9
A
312 340Right-handed alpha
Helix 19
AC1
A
345 374Right-handed alpha
Helix 20
AC2
A
377 399Right-handed alpha
Back to top of page
There are no sheets in PDB entry 6OOQ
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il