Analysis of interatomic Contacts of Structural Units in PDB entry:
6OP9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OP9 entry

There is 1 chain in PDB entry 6OP9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 680LYS 960
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6OP9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
686 688Right-handed 310
Helix 2
AA2
A
738 746Right-handed alpha
Helix 3
AA3
A
775 784Right-handed alpha
Helix 4
AA4
A
785 787Right-handed 310
Helix 5
AA5
A
788 809Right-handed alpha
Helix 6
AA6
A
817 819Right-handed 310
Helix 7
AA7
A
836 840Right-handed 310
Helix 8
AA8
A
855 859Right-handed 310
Helix 9
AA9
A
860 867Right-handed alpha
Helix 10
AB1
A
870 887Right-handed alpha
Helix 11
AB2
A
897 899Right-handed 310
Helix 12
AB3
A
900 907Right-handed alpha
Helix 13
AB4
A
918 929Right-handed alpha
Helix 14
AB5
A
938 951Right-handed alpha
Helix 15
AB6
A
952 956Right-handed 310
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There are 2 sheets in PDB entry 6OP9. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
683 684first strand
Strand 2
A
755 759parallel
Strand 3
A
764 769anti-parallel
Strand 4
A
718 725anti-parallel
Strand 5
A
703 709anti-parallel
Strand 6
A
690 698anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
821 823first strand
Strand 2
A
829 831anti-parallel
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