Analysis of interatomic Contacts of Structural Units in PDB entry:
6OPC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6OPC entry

There are 8 chains in PDB entry 6OPC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 31	MET 784
B	LYS 31	PHE 796
C	LYS 31	PHE 796
D	LYS 31	PHE 796
E	LYS 31	PHE 796
F	LYS 31	MET 784
G	UNK 1	UNK 22
Z	SER 321	TRP 422

There are184 helices in PDB entry 6OPC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	52	57	Right-handed alpha
Helix 2	AA2	A	95	102	Right-handed alpha
Helix 3	AA3	A	130	133	Right-handed 310
Helix 4	AA4	A	139	144	Right-handed alpha
Helix 5	AA5	A	144	150	Right-handed alpha
Helix 6	AA6	A	200	210	Right-handed alpha
Helix 7	AA7	A	219	236	Right-handed alpha
Helix 8	AA8	A	237	244	Right-handed alpha
Helix 9	AA9	A	260	271	Right-handed alpha
Helix 10	AB1	A	291	306	Right-handed alpha
Helix 11	AB2	A	329	344	Right-handed alpha
Helix 12	AB3	A	383	395	Right-handed alpha
Helix 13	AB4	A	396	398	Right-handed 310
Helix 14	AB5	A	405	413	Right-handed alpha
Helix 15	AB6	A	419	436	Right-handed alpha
Helix 16	AB7	A	458	468	Right-handed alpha
Helix 17	AB8	A	492	509	Right-handed alpha
Helix 18	AB9	A	509	517	Right-handed alpha
Helix 19	AC1	A	533	544	Right-handed alpha
Helix 20	AC2	A	554	558	Right-handed 310
Helix 21	AC3	A	563	579	Right-handed alpha
Helix 22	AC4	A	605	619	Right-handed alpha
Helix 23	AC5	A	635	639	Right-handed 310
Helix 24	AC6	A	659	671	Right-handed alpha
Helix 25	AC7	A	682	689	Right-handed alpha
Helix 26	AC8	A	693	725	Right-handed alpha
Helix 27	AC9	A	754	762	Right-handed alpha
Helix 28	AD1	A	763	765	Right-handed 310
Helix 29	AD2	A	770	784	Right-handed alpha
Helix 30	AD3	B	52	57	Right-handed alpha
Helix 31	AD4	B	95	102	Right-handed alpha
Helix 32	AD5	B	130	133	Right-handed 310
Helix 33	AD6	B	139	144	Right-handed alpha
Helix 34	AD7	B	144	150	Right-handed alpha
Helix 35	AD8	B	201	209	Right-handed alpha
Helix 36	AD9	B	219	236	Right-handed alpha
Helix 37	AE1	B	237	244	Right-handed alpha
Helix 38	AE2	B	260	272	Right-handed alpha
Helix 39	AE3	B	281	285	Right-handed 310
Helix 40	AE4	B	291	306	Right-handed alpha
Helix 41	AE5	B	316	319	Right-handed 310
Helix 42	AE6	B	329	343	Right-handed alpha
Helix 43	AE7	B	383	395	Right-handed alpha
Helix 44	AE8	B	405	413	Right-handed alpha
Helix 45	AE9	B	418	436	Right-handed alpha
Helix 46	AF1	B	448	453	Right-handed alpha
Helix 47	AF2	B	458	468	Right-handed alpha
Helix 48	AF3	B	492	505	Right-handed alpha
Helix 49	AF4	B	509	516	Right-handed alpha
Helix 50	AF5	B	533	545	Right-handed alpha
Helix 51	AF6	B	554	558	Right-handed 310
Helix 52	AF7	B	563	579	Right-handed alpha
Helix 53	AF8	B	606	619	Right-handed alpha
Helix 54	AF9	B	659	671	Right-handed alpha
Helix 55	AG1	B	682	689	Right-handed alpha
Helix 56	AG2	B	693	722	Right-handed alpha
Helix 57	AG3	B	754	762	Right-handed alpha
Helix 58	AG4	B	770	787	Right-handed alpha
Helix 59	AG5	C	52	57	Right-handed alpha
Helix 60	AG6	C	95	102	Right-handed alpha
Helix 61	AG7	C	130	133	Right-handed 310
Helix 62	AG8	C	139	144	Right-handed alpha
Helix 63	AG9	C	144	150	Right-handed alpha
Helix 64	AH1	C	201	210	Right-handed alpha
Helix 65	AH2	C	212	216	Right-handed 310
Helix 66	AH3	C	219	236	Right-handed alpha
Helix 67	AH4	C	237	244	Right-handed alpha
Helix 68	AH5	C	260	272	Right-handed alpha
Helix 69	AH6	C	280	284	Right-handed 310
Helix 70	AH7	C	291	307	Right-handed alpha
Helix 71	AH8	C	329	343	Right-handed alpha
Helix 72	AH9	C	383	395	Right-handed alpha
Helix 73	AI1	C	406	413	Right-handed alpha
Helix 74	AI2	C	419	440	Right-handed alpha
Helix 75	AI3	C	458	468	Right-handed alpha
Helix 76	AI4	C	485	489	Right-handed 310
Helix 77	AI5	C	492	509	Right-handed alpha
Helix 78	AI6	C	509	517	Right-handed alpha
Helix 79	AI7	C	533	545	Right-handed alpha
Helix 80	AI8	C	563	579	Right-handed alpha
Helix 81	AI9	C	588	593	Right-handed alpha
Helix 82	AJ1	C	606	619	Right-handed alpha
Helix 83	AJ2	C	635	639	Right-handed 310
Helix 84	AJ3	C	659	671	Right-handed alpha
Helix 85	AJ4	C	682	690	Right-handed alpha
Helix 86	AJ5	C	693	722	Right-handed alpha
Helix 87	AJ6	C	754	762	Right-handed alpha
Helix 88	AJ7	C	772	787	Right-handed alpha
Helix 89	AJ8	D	52	57	Right-handed alpha
Helix 90	AJ9	D	95	102	Right-handed alpha
Helix 91	AK1	D	130	133	Right-handed 310
Helix 92	AK2	D	139	144	Right-handed alpha
Helix 93	AK3	D	144	150	Right-handed alpha
Helix 94	AK4	D	201	210	Right-handed alpha
Helix 95	AK5	D	212	216	Right-handed 310
Helix 96	AK6	D	219	236	Right-handed alpha
Helix 97	AK7	D	237	244	Right-handed alpha
Helix 98	AK8	D	260	272	Right-handed alpha
Helix 99	AK9	D	291	306	Right-handed alpha
Helix 100	AL1	D	316	319	Right-handed 310
Helix 101	AL2	D	328	343	Right-handed alpha
Helix 102	AL3	D	383	395	Right-handed alpha
Helix 103	AL4	D	406	413	Right-handed alpha
Helix 104	AL5	D	418	436	Right-handed alpha
Helix 105	AL6	D	448	453	Right-handed alpha
Helix 106	AL7	D	458	468	Right-handed alpha
Helix 107	AL8	D	485	489	Right-handed 310
Helix 108	AL9	D	492	505	Right-handed alpha
Helix 109	AM1	D	509	517	Right-handed alpha
Helix 110	AM2	D	533	545	Right-handed alpha
Helix 111	AM3	D	554	558	Right-handed 310
Helix 112	AM4	D	563	579	Right-handed alpha
Helix 113	AM5	D	588	593	Right-handed alpha
Helix 114	AM6	D	601	619	Right-handed alpha
Helix 115	AM7	D	635	639	Right-handed 310
Helix 116	AM8	D	659	671	Right-handed alpha
Helix 117	AM9	D	682	688	Right-handed alpha
Helix 118	AN1	D	693	722	Right-handed alpha
Helix 119	AN2	D	754	763	Right-handed alpha
Helix 120	AN3	D	772	787	Right-handed alpha
Helix 121	AN4	E	52	57	Right-handed alpha
Helix 122	AN5	E	95	102	Right-handed alpha
Helix 123	AN6	E	130	133	Right-handed 310
Helix 124	AN7	E	139	144	Right-handed alpha
Helix 125	AN8	E	144	150	Right-handed alpha
Helix 126	AN9	E	201	209	Right-handed alpha
Helix 127	AO1	E	212	216	Right-handed 310
Helix 128	AO2	E	219	236	Right-handed alpha
Helix 129	AO3	E	237	244	Right-handed alpha
Helix 130	AO4	E	260	272	Right-handed alpha
Helix 131	AO5	E	280	285	Right-handed alpha
Helix 132	AO6	E	291	306	Right-handed alpha
Helix 133	AO7	E	328	343	Right-handed alpha
Helix 134	AO8	E	383	395	Right-handed alpha
Helix 135	AO9	E	405	413	Right-handed alpha
Helix 136	AP1	E	418	436	Right-handed alpha
Helix 137	AP2	E	458	468	Right-handed alpha
Helix 138	AP3	E	492	509	Right-handed alpha
Helix 139	AP4	E	509	517	Right-handed alpha
Helix 140	AP5	E	533	543	Right-handed alpha
Helix 141	AP6	E	563	578	Right-handed alpha
Helix 142	AP7	E	588	593	Right-handed alpha
Helix 143	AP8	E	601	619	Right-handed alpha
Helix 144	AP9	E	635	639	Right-handed 310
Helix 145	AQ1	E	659	671	Right-handed alpha
Helix 146	AQ2	E	681	688	Right-handed alpha
Helix 147	AQ3	E	693	713	Right-handed alpha
Helix 148	AQ4	E	754	762	Right-handed alpha
Helix 149	AQ5	E	771	788	Right-handed alpha
Helix 150	AQ6	F	52	57	Right-handed alpha
Helix 151	AQ7	F	95	102	Right-handed alpha
Helix 152	AQ8	F	130	133	Right-handed 310
Helix 153	AQ9	F	139	144	Right-handed alpha
Helix 154	AR1	F	144	150	Right-handed alpha
Helix 155	AR2	F	220	236	Right-handed alpha
Helix 156	AR3	F	236	244	Right-handed alpha
Helix 157	AR4	F	260	272	Right-handed alpha
Helix 158	AR5	F	282	285	Right-handed 310
Helix 159	AR6	F	291	307	Right-handed alpha
Helix 160	AR7	F	315	320	Right-handed alpha
Helix 161	AR8	F	329	344	Right-handed alpha
Helix 162	AR9	F	384	395	Right-handed alpha
Helix 163	AS1	F	396	398	Right-handed 310
Helix 164	AS2	F	405	413	Right-handed alpha
Helix 165	AS3	F	419	436	Right-handed alpha
Helix 166	AS4	F	449	454	Right-handed alpha
Helix 167	AS5	F	458	468	Right-handed alpha
Helix 168	AS6	F	485	489	Right-handed 310
Helix 169	AS7	F	492	508	Right-handed alpha
Helix 170	AS8	F	510	516	Right-handed alpha
Helix 171	AS9	F	533	544	Right-handed alpha
Helix 172	AT1	F	554	558	Right-handed 310
Helix 173	AT2	F	564	579	Right-handed alpha
Helix 174	AT3	F	588	594	Right-handed alpha
Helix 175	AT4	F	601	619	Right-handed alpha
Helix 176	AT5	F	660	671	Right-handed alpha
Helix 177	AT6	F	682	689	Right-handed alpha
Helix 178	AT7	F	693	725	Right-handed alpha
Helix 179	AT8	F	754	762	Right-handed alpha
Helix 180	AT9	F	763	765	Right-handed 310
Helix 181	AU1	F	770	784	Right-handed alpha
Helix 182	AU2	Z	324	337	Right-handed alpha
Helix 183	AU3	Z	342	347	Right-handed 310
Helix 184	AU4	Z	370	382	Right-handed alpha

There are 31 sheets in PDB entry 6OPC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	39	first strand
Strand 2	A	91	94	parallel
Strand 3	A	49	51	anti-parallel
Strand 4	A	76	83	parallel
Strand 5	A	66	70	anti-parallel
Strand 6	A	109	114	anti-parallel
Strand 7	A	35	39	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	161	165	first strand
Strand 2	A	170	178	anti-parallel
Strand 3	A	123	128	anti-parallel
Strand 4	A	191	194	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	155	157	first strand
Strand 2	A	183	185	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	276	280	first strand
Strand 2	A	310	314	parallel
Strand 3	A	352	356	parallel
Strand 4	A	251	254	parallel
Strand 5	A	375	378	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	550	552	first strand
Strand 2	A	583	587	parallel
Strand 3	A	628	632	parallel
Strand 4	A	523	527	parallel
Strand 5	A	653	654	parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	39	first strand
Strand 2	B	91	94	parallel
Strand 3	B	49	51	anti-parallel
Strand 4	B	76	83	parallel
Strand 5	B	66	70	anti-parallel
Strand 6	B	109	114	anti-parallel
Strand 7	B	35	39	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	161	165	first strand
Strand 2	B	170	178	anti-parallel
Strand 3	B	123	128	anti-parallel
Strand 4	B	191	194	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	155	157	first strand
Strand 2	B	183	185	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	276	279	first strand
Strand 2	B	310	314	parallel
Strand 3	B	352	357	parallel
Strand 4	B	251	254	parallel
Strand 5	B	375	378	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	548	552	first strand
Strand 2	B	582	587	parallel
Strand 3	B	627	633	parallel
Strand 4	B	524	527	parallel
Strand 5	B	651	654	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	35	39	first strand
Strand 2	C	91	94	parallel
Strand 3	C	49	51	anti-parallel
Strand 4	C	76	83	parallel
Strand 5	C	66	70	anti-parallel
Strand 6	C	109	114	anti-parallel
Strand 7	C	35	39	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	161	165	first strand
Strand 2	C	170	178	anti-parallel
Strand 3	C	123	128	anti-parallel
Strand 4	C	191	194	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	155	157	first strand
Strand 2	C	183	185	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	250	253	first strand
Strand 2	C	352	356	parallel
Strand 3	C	309	314	parallel
Strand 4	C	275	279	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	548	552	first strand
Strand 2	C	582	587	parallel
Strand 3	C	627	633	parallel
Strand 4	C	524	527	parallel
Strand 5	C	651	654	parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	35	39	first strand
Strand 2	D	91	94	parallel
Strand 3	D	49	51	anti-parallel
Strand 4	D	76	83	parallel
Strand 5	D	66	70	anti-parallel
Strand 6	D	109	114	anti-parallel
Strand 7	D	35	39	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	161	165	first strand
Strand 2	D	170	178	anti-parallel
Strand 3	D	123	128	anti-parallel
Strand 4	D	191	194	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	155	157	first strand
Strand 2	D	183	185	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	250	253	first strand
Strand 2	D	352	356	parallel
Strand 3	D	309	314	parallel
Strand 4	D	275	279	parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	548	552	first strand
Strand 2	D	582	587	parallel
Strand 3	D	627	633	parallel
Strand 4	D	524	527	parallel
Strand 5	D	651	654	parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	35	39	first strand
Strand 2	E	91	94	parallel
Strand 3	E	49	51	anti-parallel
Strand 4	E	76	83	parallel
Strand 5	E	66	70	anti-parallel
Strand 6	E	109	114	anti-parallel
Strand 7	E	35	39	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	161	165	first strand
Strand 2	E	170	178	anti-parallel
Strand 3	E	123	128	anti-parallel
Strand 4	E	191	194	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	155	157	first strand
Strand 2	E	183	185	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	276	279	first strand
Strand 2	E	310	314	parallel
Strand 3	E	352	357	parallel
Strand 4	E	250	254	parallel
Strand 5	E	375	378	parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	548	552	first strand
Strand 2	E	582	587	parallel
Strand 3	E	628	632	parallel
Strand 4	E	524	527	parallel
Strand 5	E	651	654	parallel

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There are 7 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	35	39	first strand
Strand 2	F	91	94	parallel
Strand 3	F	49	51	anti-parallel
Strand 4	F	76	83	parallel
Strand 5	F	66	70	anti-parallel
Strand 6	F	109	114	anti-parallel
Strand 7	F	35	39	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	161	165	first strand
Strand 2	F	170	178	anti-parallel
Strand 3	F	123	128	anti-parallel
Strand 4	F	191	194	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	155	157	first strand
Strand 2	F	183	185	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	276	280	first strand
Strand 2	F	310	314	parallel
Strand 3	F	352	356	parallel
Strand 4	F	250	254	parallel
Strand 5	F	375	378	parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	550	552	first strand
Strand 2	F	582	587	parallel
Strand 3	F	627	633	parallel
Strand 4	F	524	527	parallel
Strand 5	F	653	654	parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	360	364	first strand
Strand 2	Z	351	355	anti-parallel
Strand 3	Z	417	421	parallel
Strand 4	Z	391	394	anti-parallel
Strand 5	Z	399	401	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6OPC

Analysis of interatomic Contacts of Structural Units in PDB entry:
6OPC