Analysis of interatomic Contacts of Structural Units in PDB entry:
6OQ5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6OQ5 entry

There are 4 chains in PDB entry 6OQ5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	HIS 2369
D	SER 0	VAL 125
E	LEU 4	SER 110
F	GLN 1	SER 116

There are 66 helices in PDB entry 6OQ5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	5	13	Right-handed alpha
Helix 2	AA2	A	21	36	Right-handed alpha
Helix 3	AA3	A	41	63	Right-handed alpha
Helix 4	AA4	A	68	73	Right-handed alpha
Helix 5	AA5	A	75	82	Right-handed alpha
Helix 6	AA6	A	85	90	Right-handed alpha
Helix 7	AA7	A	108	122	Right-handed alpha
Helix 8	AA8	A	137	155	Right-handed alpha
Helix 9	AA9	A	156	160	Right-handed 310
Helix 10	AB1	A	167	197	Right-handed alpha
Helix 11	AB2	A	201	213	Right-handed alpha
Helix 12	AB3	A	217	233	Right-handed alpha
Helix 13	AB4	A	245	250	Right-handed alpha
Helix 14	AB5	A	254	259	Right-handed alpha
Helix 15	AB6	A	264	280	Right-handed alpha
Helix 16	AB7	A	311	325	Right-handed alpha
Helix 17	AB8	A	335	339	Right-handed 310
Helix 18	AB9	A	340	354	Right-handed alpha
Helix 19	AC1	A	356	360	Right-handed 310
Helix 20	AC2	A	394	420	Right-handed alpha
Helix 21	AC3	A	424	440	Right-handed alpha
Helix 22	AC4	A	444	449	Right-handed alpha
Helix 23	AC5	A	464	468	Right-handed 310
Helix 24	AC6	A	472	484	Right-handed alpha
Helix 25	AC7	A	495	500	Right-handed alpha
Helix 26	AC8	A	514	519	Right-handed alpha
Helix 27	AC9	A	524	536	Right-handed alpha
Helix 28	AD1	A	547	551	Right-handed 310
Helix 29	AD2	A	559	569	Right-handed alpha
Helix 30	AD3	A	590	601	Right-handed alpha
Helix 31	AD4	A	638	642	Right-handed 310
Helix 32	AD5	A	668	684	Right-handed alpha
Helix 33	AD6	A	713	728	Right-handed alpha
Helix 34	AD7	A	765	776	Right-handed alpha
Helix 35	AD8	A	794	809	Right-handed alpha
Helix 36	AD9	A	817	834	Right-handed alpha
Helix 37	AE1	A	852	871	Right-handed alpha
Helix 38	AE2	A	872	877	Right-handed 310
Helix 39	AE3	A	917	934	Right-handed alpha
Helix 40	AE4	A	935	937	Right-handed 310
Helix 41	AE5	A	959	962	Right-handed 310
Helix 42	AE6	A	963	971	Right-handed alpha
Helix 43	AE7	A	981	993	Right-handed alpha
Helix 44	AE8	A	1006	1013	Right-handed alpha
Helix 45	AE9	A	1049	1054	Right-handed alpha
Helix 46	AF1	A	1063	1083	Right-handed alpha
Helix 47	AF2	A	1117	1130	Right-handed alpha
Helix 48	AF3	A	1204	1207	Right-handed 310
Helix 49	AF4	A	1246	1259	Right-handed alpha
Helix 50	AF5	A	1306	1312	Right-handed alpha
Helix 51	AF6	A	1372	1376	Right-handed 310
Helix 52	AF7	A	1433	1439	Right-handed alpha
Helix 53	AF8	A	1440	1451	Right-handed alpha
Helix 54	AF9	A	1559	1574	Right-handed alpha
Helix 55	AG1	A	1580	1589	Right-handed alpha
Helix 56	AG2	A	1590	1595	Right-handed 310
Helix 57	AG3	A	1651	1653	Right-handed 310
Helix 58	AG4	A	1680	1682	Right-handed 310
Helix 59	AG5	A	1685	1689	Right-handed 310
Helix 60	AG6	A	1774	1779	Right-handed alpha
Helix 61	AG7	A	1792	1800	Right-handed alpha
Helix 62	AG8	A	1868	1872	Right-handed 310
Helix 63	AG9	A	2045	2049	Right-handed 310
Helix 64	AH1	D	87	91	Right-handed 310
Helix 65	AH2	E	86	90	Right-handed 310
Helix 66	AH3	F	86	90	Right-handed 310

There are 51 sheets in PDB entry 6OQ5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	92	93	first strand
Strand 2	A	368	369	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	237	239	first strand
Strand 2	A	126	131	parallel
Strand 3	A	97	101	parallel
Strand 4	A	283	285	parallel
Strand 5	A	387	389	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	290	291	first strand
Strand 2	A	509	510	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	383	384	first strand
Strand 2	A	376	378	anti-parallel
Strand 3	A	503	504	parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	629	633	first strand
Strand 2	A	618	622	anti-parallel
Strand 3	A	607	610	anti-parallel
Strand 4	A	580	584	parallel
Strand 5	A	646	652	parallel
Strand 6	A	691	697	parallel
Strand 7	A	736	741	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	745	747	first strand
Strand 2	A	753	756	anti-parallel
Strand 3	A	762	763	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	779	781	first strand
Strand 2	A	788	790	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	884	885	first strand
Strand 2	A	901	902	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1106	1107	first strand
Strand 2	A	1112	1113	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1137	1140	first strand
Strand 2	A	1144	1147	anti-parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1162	1165	first strand
Strand 2	A	1153	1157	anti-parallel
Strand 3	A	1288	1291	parallel
Strand 4	A	1315	1316	parallel
Strand 5	A	1335	1339	parallel
Strand 6	A	1388	1394	parallel
Strand 7	A	1383	1385	anti-parallel
Strand 8	A	1377	1378	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1201	1202	first strand
Strand 2	A	1168	1170	anti-parallel
Strand 3	A	1229	1237	parallel
Strand 4	A	1273	1281	anti-parallel
Strand 5	A	1266	1268	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1172	1173	first strand
Strand 2	A	1193	1194	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1181	1182	first strand
Strand 2	A	1185	1186	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1221	1222	first strand
Strand 2	A	1299	1300	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1323	1327	first strand
Strand 2	A	1344	1348	parallel
Strand 3	A	1402	1410	parallel
Strand 4	A	1413	1420	anti-parallel
Strand 5	A	1425	1431	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1354	1357	first strand
Strand 2	A	1364	1368	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1460	1465	first strand
Strand 2	A	1471	1477	anti-parallel
Strand 3	A	1482	1488	anti-parallel
Strand 4	A	1494	1499	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1518	1521	first strand
Strand 2	A	1526	1533	anti-parallel
Strand 3	A	1538	1545	anti-parallel
Strand 4	A	1550	1558	anti-parallel
Strand 5	A	1604	1606	parallel

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There are 14 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1518	1521	first strand
Strand 2	A	1526	1533	anti-parallel
Strand 3	A	1538	1545	anti-parallel
Strand 4	A	1550	1558	anti-parallel
Strand 5	A	1612	1616	parallel
Strand 6	A	1621	1626	anti-parallel
Strand 7	A	1632	1638	anti-parallel
Strand 8	A	1644	1649	anti-parallel
Strand 9	A	1656	1660	anti-parallel
Strand 10	A	1691	1694	parallel
Strand 11	A	1717	1720	parallel
Strand 12	A	1765	1768	parallel
Strand 13	A	1749	1753	anti-parallel
Strand 14	A	1742	1746	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1676	1678	first strand
Strand 2	A	1702	1706	parallel
Strand 3	A	1730	1734	parallel
Strand 4	A	1781	1784	parallel
Strand 5	A	1789	1791	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1815	1819	first strand
Strand 2	A	1822	1826	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1837	1839	first strand
Strand 2	A	1842	1844	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1858	1859	first strand
Strand 2	A	1864	1865	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1878	1882	first strand
Strand 2	A	1885	1889	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1899	1900	first strand
Strand 2	A	1907	1910	anti-parallel
Strand 3	A	1922	1924	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1928	1932	first strand
Strand 2	A	1935	1939	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1951	1952	first strand
Strand 2	A	1955	1956	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1970	1973	first strand
Strand 2	A	1976	1979	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1990	1992	first strand
Strand 2	A	1997	1999	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2009	2013	first strand
Strand 2	A	2016	2020	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2030	2031	first strand
Strand 2	A	2038	2039	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2059	2062	first strand
Strand 2	A	2067	2070	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2080	2083	first strand
Strand 2	A	2086	2090	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2103	2104	first strand
Strand 2	A	2108	2109	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2123	2124	first strand
Strand 2	A	2129	2130	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2141	2145	first strand
Strand 2	A	2148	2152	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2161	2165	first strand
Strand 2	A	2168	2173	anti-parallel
Strand 3	A	2185	2187	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2235	2238	first strand
Strand 2	A	2243	2246	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2255	2259	first strand
Strand 2	A	2262	2266	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2277	2278	first strand
Strand 2	A	2283	2284	anti-parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2295	2299	first strand
Strand 2	A	2302	2307	anti-parallel
Strand 3	A	2319	2321	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2325	2329	first strand
Strand 2	A	2332	2336	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2345	2349	first strand
Strand 2	A	2352	2356	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	6	7	first strand
Strand 2	D	16	23	anti-parallel
Strand 3	D	78	86	anti-parallel
Strand 4	D	69	73	anti-parallel

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There are 5 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	58	60	first strand
Strand 2	D	46	51	anti-parallel
Strand 3	D	33	39	anti-parallel
Strand 4	D	92	99	anti-parallel
Strand 5	D	114	117	anti-parallel

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There are 5 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	58	60	first strand
Strand 2	D	46	51	anti-parallel
Strand 3	D	33	39	anti-parallel
Strand 4	D	92	99	anti-parallel
Strand 5	D	121	123	anti-parallel

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There are 4 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	5	7	first strand
Strand 2	E	18	23	anti-parallel
Strand 3	E	77	82	anti-parallel
Strand 4	E	68	71	anti-parallel

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There are 5 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	11	12	first strand
Strand 2	E	105	109	parallel
Strand 3	E	91	96	anti-parallel
Strand 4	E	34	39	anti-parallel
Strand 5	E	45	51	anti-parallel

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There are 4 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	3	7	first strand
Strand 2	F	17	25	anti-parallel
Strand 3	F	77	83	anti-parallel
Strand 4	F	71	72	anti-parallel

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There are 6 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	11	12	first strand
Strand 2	F	110	114	parallel
Strand 3	F	91	96	anti-parallel
Strand 4	F	34	39	anti-parallel
Strand 5	F	46	51	anti-parallel
Strand 6	F	57	59	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6OQ5

Analysis of interatomic Contacts of Structural Units in PDB entry:
6OQ5