Analysis of interatomic Contacts of Structural Units in PDB entry:
6OQ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OQ6 entry

There are 2 chains in PDB entry 6OQ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 1090SER 1431
D
 SER 0SER 127
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 6OQ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1117 1129Right-handed alpha
Helix 2
AA2
A
1129 1134Right-handed alpha
Helix 3
AA3
A
1204 1207Right-handed 310
Helix 4
AA4
A
1246 1259Right-handed alpha
Helix 5
AA5
A
1306 1311Right-handed alpha
Helix 6
AA6
A
1371 1375Right-handed 310
Helix 7
AA7
D
87 91Right-handed 310
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There are 9 sheets in PDB entry 6OQ6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1106 1107first strand
Strand 2
A
1112 1113anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1137 1140first strand
Strand 2
A
1144 1147anti-parallel
Strand 3
A
1220 1222parallel
Strand 4
A
1296 1300parallel
Strand 5
A
1323 1327parallel
Strand 6
A
1344 1348parallel
Strand 7
A
1402 1410parallel
Strand 8
A
1413 1420anti-parallel
Strand 9
A
1425 1431anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1162 1165first strand
Strand 2
A
1153 1157anti-parallel
Strand 3
A
1286 1291parallel
Strand 4
A
1313 1318parallel
Strand 5
A
1335 1339parallel
Strand 6
A
1388 1394parallel
Strand 7
A
1382 1385anti-parallel
Strand 8
A
1377 1379anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1180 1182first strand
Strand 2
A
1185 1188anti-parallel
Strand 3
A
1266 1269parallel
Strand 4
A
1272 1280anti-parallel
Strand 5
A
1229 1237anti-parallel
Strand 6
A
1168 1170parallel
Strand 7
A
1201 1202anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1172 1174first strand
Strand 2
A
1193 1195anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1354 1358first strand
Strand 2
A
1363 1368anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 7first strand
Strand 2
D
16 25anti-parallel
Strand 3
D
78 86anti-parallel
Strand 4
D
69 73anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
11 12first strand
Strand 2
D
121 125parallel
Strand 3
D
92 99anti-parallel
Strand 4
D
33 39anti-parallel
Strand 5
D
46 51anti-parallel
Strand 6
D
58 60anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
11 12first strand
Strand 2
D
121 125parallel
Strand 3
D
92 99anti-parallel
Strand 4
D
114 117anti-parallel
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