Analysis of interatomic Contacts of Structural Units in PDB entry:
6OQR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OQR entry

There are 22 chains in PDB entry 6OQR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
W
GLU 2LEU 174
C
GLN 2TRP 513
B
MET 1GLN 511
A
ASN 4GLN 511
X
MET 1LEU 156
H
THR 3MET 138
G
ALA 1ALA 284
F
THR 2LEU 459
E
MET 0LEU 459
D
MET 0LEU 459
J
ASN 3ALA 79
L
ASN 3ALA 79
M
ASN 3ALA 79
N
ASN 3ALA 79
O
ASN 3ALA 79
P
ASN 3ALA 79
Q
ASN 3ALA 79
R
ASN 3VAL 78
Y
MET 1LEU 156
a
GLU 4GLU 269
I
ASN 3ALA 79
S
ASN 3ALA 79
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are204 helices in PDB entry 6OQR. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
W
3 21Right-handed alpha
Helix 2
AA2
W
23 39Right-handed alpha
Helix 3
AA3
W
40 47Right-handed alpha
Helix 4
AA4
W
52 62Right-handed alpha
Helix 5
AA5
W
70 83Right-handed alpha
Helix 6
AA6
W
84 86Right-handed 310
Helix 7
AA7
W
87 103Right-handed alpha
Helix 8
AA8
W
119 132Right-handed alpha
Helix 9
AA9
W
162 174Right-handed alpha
Helix 10
AB1
C
8 18Right-handed alpha
Helix 11
AB2
C
100 104Right-handed 310
Helix 12
AB3
C
135 139Right-handed 310
Helix 13
AB4
C
150 157Right-handed alpha
Helix 14
AB5
C
174 185Right-handed alpha
Helix 15
AB6
C
201 215Right-handed alpha
Helix 16
AB7
C
217 219Right-handed 310
Helix 17
AB8
C
231 251Right-handed alpha
Helix 18
AB9
C
262 277Right-handed alpha
Helix 19
AC1
C
282 286Right-handed 310
Helix 20
AC2
C
287 288Right-handed 310
Helix 21
AC3
C
289 299Right-handed alpha
Helix 22
AC4
C
305 313Right-handed alpha
Helix 23
AC5
C
333 336Right-handed 310
Helix 24
AC6
C
339 349Right-handed alpha
Helix 25
AC7
C
356 362Right-handed alpha
Helix 26
AC8
C
377 382Right-handed 310
Helix 27
AC9
C
383 404Right-handed alpha
Helix 28
AD1
C
405 413Right-handed 310
Helix 29
AD2
C
414 431Right-handed alpha
Helix 30
AD3
C
440 453Right-handed alpha
Helix 31
AD4
C
454 458Right-handed 310
Helix 32
AD5
C
460 462Right-handed 310
Helix 33
AD6
C
463 479Right-handed alpha
Helix 34
AD7
C
479 490Right-handed alpha
Helix 35
AD8
C
493 511Right-handed alpha
Helix 36
AD9
B
4 18Right-handed alpha
Helix 37
AE1
B
150 156Right-handed alpha
Helix 38
AE2
B
174 186Right-handed alpha
Helix 39
AE3
B
187 189Right-handed 310
Helix 40
AE4
B
201 215Right-handed alpha
Helix 41
AE5
B
217 219Right-handed 310
Helix 42
AE6
B
231 252Right-handed alpha
Helix 43
AE7
B
262 276Right-handed alpha
Helix 44
AE8
B
282 286Right-handed 310
Helix 45
AE9
B
287 288Right-handed 310
Helix 46
AF1
B
289 299Right-handed alpha
Helix 47
AF2
B
305 313Right-handed alpha
Helix 48
AF3
B
333 336Right-handed 310
Helix 49
AF4
B
340 347Right-handed alpha
Helix 50
AF5
B
356 362Right-handed alpha
Helix 51
AF6
B
377 382Right-handed 310
Helix 52
AF7
B
383 391Right-handed alpha
Helix 53
AF8
B
392 407Right-handed alpha
Helix 54
AF9
B
413 431Right-handed alpha
Helix 55
AG1
B
440 453Right-handed alpha
Helix 56
AG2
B
454 459Right-handed 310
Helix 57
AG3
B
460 462Right-handed 310
Helix 58
AG4
B
463 478Right-handed alpha
Helix 59
AG5
B
479 489Right-handed alpha
Helix 60
AG6
B
493 509Right-handed alpha
Helix 61
AG7
A
5 20Right-handed alpha
Helix 62
AG8
A
100 104Right-handed 310
Helix 63
AG9
A
135 139Right-handed 310
Helix 64
AH1
A
150 157Right-handed alpha
Helix 65
AH2
A
174 185Right-handed alpha
Helix 66
AH3
A
186 189Right-handed 310
Helix 67
AH4
A
201 215Right-handed alpha
Helix 68
AH5
A
217 219Right-handed 310
Helix 69
AH6
A
231 252Right-handed alpha
Helix 70
AH7
A
263 276Right-handed alpha
Helix 71
AH8
A
282 286Right-handed 310
Helix 72
AH9
A
289 299Right-handed alpha
Helix 73
AI1
A
305 313Right-handed alpha
Helix 74
AI2
A
333 336Right-handed 310
Helix 75
AI3
A
339 346Right-handed alpha
Helix 76
AI4
A
356 362Right-handed alpha
Helix 77
AI5
A
377 382Right-handed 310
Helix 78
AI6
A
383 391Right-handed alpha
Helix 79
AI7
A
392 407Right-handed alpha
Helix 80
AI8
A
414 432Right-handed alpha
Helix 81
AI9
A
440 453Right-handed alpha
Helix 82
AJ1
A
460 479Right-handed alpha
Helix 83
AJ2
A
479 490Right-handed alpha
Helix 84
AJ3
A
493 509Right-handed alpha
Helix 85
AJ4
X
5 25Right-handed alpha
Helix 86
AJ5
X
25 136Right-handed alpha
Helix 87
AJ6
X
142 144Right-handed 310
Helix 88
AJ7
X
145 155Right-handed alpha
Helix 89
AJ8
H
86 103Right-handed alpha
Helix 90
AJ9
H
111 125Right-handed alpha
Helix 91
AK1
H
129 134Right-handed alpha
Helix 92
AK2
G
2 40Right-handed alpha
Helix 93
AK3
G
41 58Right-handed alpha
Helix 94
AK4
G
64 68Right-handed 310
Helix 95
AK5
G
89 108Right-handed alpha
Helix 96
AK6
G
118 129Right-handed alpha
Helix 97
AK7
G
144 161Right-handed alpha
Helix 98
AK8
G
196 203Right-handed 310
Helix 99
AK9
G
210 281Right-handed alpha
Helix 100
AL1
F
80 84Right-handed 310
Helix 101
AL2
F
115 119Right-handed 310
Helix 102
AL3
F
130 137Right-handed alpha
Helix 103
AL4
F
156 168Right-handed alpha
Helix 104
AL5
F
182 195Right-handed alpha
Helix 105
AL6
F
196 197Right-handed 310
Helix 106
AL7
F
198 200Right-handed 310
Helix 107
AL8
F
212 233Right-handed alpha
Helix 108
AL9
F
244 256Right-handed alpha
Helix 109
AM1
F
257 259Right-handed 310
Helix 110
AM2
F
270 280Right-handed alpha
Helix 111
AM3
F
299 302Right-handed 310
Helix 112
AM4
F
305 310Right-handed alpha
Helix 113
AM5
F
311 315Right-handed 310
Helix 114
AM6
F
322 327Right-handed alpha
Helix 115
AM7
F
345 350Right-handed alpha
Helix 116
AM8
F
350 370Right-handed alpha
Helix 117
AM9
F
370 378Right-handed alpha
Helix 118
AN1
F
379 382Right-handed 310
Helix 119
AN2
F
385 400Right-handed alpha
Helix 120
AN3
F
407 412Right-handed alpha
Helix 121
AN4
F
419 433Right-handed alpha
Helix 122
AN5
F
439 444Right-handed 310
Helix 123
AN6
F
448 458Right-handed alpha
Helix 124
AN7
E
80 84Right-handed 310
Helix 125
AN8
E
115 119Right-handed 310
Helix 126
AN9
E
130 137Right-handed alpha
Helix 127
AO1
E
154 169Right-handed alpha
Helix 128
AO2
E
182 195Right-handed alpha
Helix 129
AO3
E
197 202Right-handed 310
Helix 130
AO4
E
212 233Right-handed alpha
Helix 131
AO5
E
243 259Right-handed alpha
Helix 132
AO6
E
270 280Right-handed alpha
Helix 133
AO7
E
298 302Right-handed 310
Helix 134
AO8
E
305 313Right-handed alpha
Helix 135
AO9
E
322 328Right-handed alpha
Helix 136
AP1
E
345 350Right-handed alpha
Helix 137
AP2
E
350 378Right-handed alpha
Helix 138
AP3
E
379 382Right-handed 310
Helix 139
AP4
E
383 400Right-handed alpha
Helix 140
AP5
E
404 406Right-handed 310
Helix 141
AP6
E
407 412Right-handed alpha
Helix 142
AP7
E
419 432Right-handed alpha
Helix 143
AP8
E
439 444Right-handed 310
Helix 144
AP9
E
451 458Right-handed alpha
Helix 145
AQ1
D
80 84Right-handed 310
Helix 146
AQ2
D
130 137Right-handed alpha
Helix 147
AQ3
D
154 170Right-handed alpha
Helix 148
AQ4
D
182 196Right-handed alpha
Helix 149
AQ5
D
198 200Right-handed 310
Helix 150
AQ6
D
212 233Right-handed alpha
Helix 151
AQ7
D
243 258Right-handed alpha
Helix 152
AQ8
D
270 280Right-handed alpha
Helix 153
AQ9
D
299 302Right-handed 310
Helix 154
AR1
D
305 312Right-handed alpha
Helix 155
AR2
D
313 315Right-handed 310
Helix 156
AR3
D
322 328Right-handed alpha
Helix 157
AR4
D
345 378Right-handed alpha
Helix 158
AR5
D
379 382Right-handed 310
Helix 159
AR6
D
383 400Right-handed alpha
Helix 160
AR7
D
407 412Right-handed alpha
Helix 161
AR8
D
419 431Right-handed alpha
Helix 162
AR9
D
439 444Right-handed 310
Helix 163
AS1
D
449 459Right-handed alpha
Helix 164
AS2
J
4 42Right-handed alpha
Helix 165
AS3
J
45 61Right-handed alpha
Helix 166
AS4
J
61 76Right-handed alpha
Helix 167
AS5
L
4 42Right-handed alpha
Helix 168
AS6
L
45 61Right-handed alpha
Helix 169
AS7
L
61 77Right-handed alpha
Helix 170
AS8
M
4 42Right-handed alpha
Helix 171
AS9
M
45 77Right-handed alpha
Helix 172
AT1
N
4 42Right-handed alpha
Helix 173
AT2
N
45 61Right-handed alpha
Helix 174
AT3
N
61 77Right-handed alpha
Helix 175
AT4
O
5 42Right-handed alpha
Helix 176
AT5
O
45 63Right-handed alpha
Helix 177
AT6
O
63 77Right-handed alpha
Helix 178
AT7
P
7 42Right-handed alpha
Helix 179
AT8
P
45 78Right-handed alpha
Helix 180
AT9
Q
4 42Right-handed alpha
Helix 181
AU1
Q
45 77Right-handed alpha
Helix 182
AU2
R
4 42Right-handed alpha
Helix 183
AU3
R
45 61Right-handed alpha
Helix 184
AU4
R
61 77Right-handed alpha
Helix 185
AU5
Y
3 25Right-handed alpha
Helix 186
AU6
Y
25 140Right-handed alpha
Helix 187
AU7
Y
141 156Right-handed alpha
Helix 188
AU8
a
7 15Right-handed alpha
Helix 189
AU9
a
46 65Right-handed alpha
Helix 190
AV1
a
73 94Right-handed alpha
Helix 191
AV2
a
100 118Right-handed alpha
Helix 192
AV3
a
119 121Right-handed 310
Helix 193
AV4
a
124 133Right-handed alpha
Helix 194
AV5
a
142 145Right-handed 310
Helix 195
AV6
a
146 181Right-handed alpha
Helix 196
AV7
a
185 187Right-handed 310
Helix 197
AV8
a
188 229Right-handed alpha
Helix 198
AV9
a
230 233Right-handed 310
Helix 199
AW1
a
234 269Right-handed alpha
Helix 200
AW2
I
4 42Right-handed alpha
Helix 201
AW3
I
45 77Right-handed alpha
Helix 202
AW4
S
6 42Right-handed alpha
Helix 203
AW5
S
45 61Right-handed alpha
Helix 204
AW6
S
61 77Right-handed alpha
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There are 29 sheets in PDB entry 6OQR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
W
105 106first strand
Strand 2
W
135 136parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
W
139 142first strand
Strand 2
W
109 112parallel
Strand 3
W
150 154anti-parallel
Strand 4
W
157 160anti-parallel
Strand 5
B
25 35anti-parallel
Strand 6
B
38 43anti-parallel
Strand 7
B
70 75anti-parallel
Strand 8
B
59 66anti-parallel
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There are 11 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
25 35first strand
Strand 2
B
87 94anti-parallel
Strand 3
B
51 55anti-parallel
Strand 4
B
59 66anti-parallel
Strand 5
F
3 9anti-parallel
Strand 6
F
12 16anti-parallel
Strand 7
F
50 55anti-parallel
Strand 8
F
38 45anti-parallel
Strand 9
F
28 31anti-parallel
Strand 10
F
67 71anti-parallel
Strand 11
F
3 9anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
59 67first strand
Strand 2
C
52 55anti-parallel
Strand 3
C
87 90anti-parallel
Strand 4
C
28 35anti-parallel
Strand 5
C
38 43anti-parallel
Strand 6
C
70 75anti-parallel
Strand 7
C
59 67anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
59 67first strand
Strand 2
D
3 9anti-parallel
Strand 3
D
12 16anti-parallel
Strand 4
D
50 55anti-parallel
Strand 5
D
37 45anti-parallel
Strand 6
D
27 32anti-parallel
Strand 7
D
67 74anti-parallel
Strand 8
D
3 9anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
37 45first strand
Strand 2
A
28 35anti-parallel
Strand 3
A
87 94anti-parallel
Strand 4
A
51 55anti-parallel
Strand 5
A
59 66anti-parallel
Strand 6
A
71 75anti-parallel
Strand 7
A
38 43anti-parallel
Strand 8
A
28 35anti-parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
59 66first strand
Strand 2
E
3 9anti-parallel
Strand 3
E
67 70anti-parallel
Strand 4
E
28 33anti-parallel
Strand 5
E
36 45anti-parallel
Strand 6
E
50 55anti-parallel
Strand 7
E
12 16anti-parallel
Strand 8
E
3 9anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
96 98first strand
Strand 2
C
126 128anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
107 109first strand
Strand 2
C
221 226parallel
Strand 3
C
191 198parallel
Strand 4
C
255 261parallel
Strand 5
C
322 326parallel
Strand 6
C
303 304anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
329 331first strand
Strand 2
C
165 169parallel
Strand 3
C
351 355parallel
Strand 4
C
374 375anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
96 98first strand
Strand 2
B
126 128anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
107 109first strand
Strand 2
B
221 226parallel
Strand 3
B
192 198parallel
Strand 4
B
255 260parallel
Strand 5
B
323 326parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
329 331first strand
Strand 2
B
166 169parallel
Strand 3
B
351 355parallel
Strand 4
B
374 375anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
96 98first strand
Strand 2
A
126 128anti-parallel
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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
107 109first strand
Strand 2
A
221 226parallel
Strand 3
A
192 198parallel
Strand 4
A
255 260parallel
Strand 5
A
322 331parallel
Strand 6
A
303 304anti-parallel
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There are 8 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
107 109first strand
Strand 2
A
221 226parallel
Strand 3
A
192 198parallel
Strand 4
A
255 260parallel
Strand 5
A
322 331parallel
Strand 6
A
166 169parallel
Strand 7
A
351 355parallel
Strand 8
A
374 375anti-parallel
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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
31 34first strand
Strand 2
H
14 27anti-parallel
Strand 3
H
4 9anti-parallel
Strand 4
H
75 79parallel
Strand 5
H
68 71anti-parallel
Strand 6
G
206 208first strand
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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
14 27first strand
Strand 2
H
41 54anti-parallel
Strand 3
H
58 64anti-parallel
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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
132 136first strand
Strand 2
G
111 117parallel
Strand 3
G
74 80parallel
Strand 4
G
166 176parallel
Strand 5
G
179 188anti-parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
76 79first strand
Strand 2
F
105 108anti-parallel
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There are 8 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
87 88first strand
Strand 2
F
202 207parallel
Strand 3
F
174 179parallel
Strand 4
F
236 241parallel
Strand 5
F
289 297parallel
Strand 6
F
144 149parallel
Strand 7
F
317 320parallel
Strand 8
F
340 341anti-parallel
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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
125 126first strand
Strand 2
F
139 140anti-parallel
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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
76 78first strand
Strand 2
E
106 108anti-parallel
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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
87 88first strand
Strand 2
E
203 207parallel
Strand 3
E
173 179parallel
Strand 4
E
236 241parallel
Strand 5
E
288 295parallel
Strand 6
E
284 285anti-parallel
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There are 8 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
87 88first strand
Strand 2
E
203 207parallel
Strand 3
E
173 179parallel
Strand 4
E
236 241parallel
Strand 5
E
288 295parallel
Strand 6
E
144 147parallel
Strand 7
E
317 319parallel
Strand 8
E
340 341anti-parallel
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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
125 126first strand
Strand 2
E
139 140anti-parallel
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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
76 79first strand
Strand 2
D
105 108anti-parallel
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There are 8 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
87 88first strand
Strand 2
D
202 208parallel
Strand 3
D
174 181parallel
Strand 4
D
236 241parallel
Strand 5
D
289 297parallel
Strand 6
D
144 149parallel
Strand 7
D
317 320parallel
Strand 8
D
340 341anti-parallel
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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
a
20 22first strand
Strand 2
a
40 42anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il