Analysis of interatomic Contacts of Structural Units in PDB entry:
6OQW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6OQW entry

There are 22 chains in PDB entry 6OQW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
W	GLU 2	LEU 174
C	GLN 2	GLN 511
B	MET 1	TRP 513
A	ASN 4	TRP 513
X	MET 1	VAL 153
H	THR 3	MET 138
G	ALA 1	ALA 284
F	THR 2	LEU 459
E	MET 0	LEU 459
D	MET 0	LEU 459
I	ASN 3	ALA 79
J	ASN 3	ALA 79
L	ASN 3	ALA 79
M	ASN 3	ALA 79
N	ASN 3	ALA 79
O	ASN 3	ALA 79
P	ASN 3	ALA 79
Q	ASN 3	ALA 79
R	ASN 3	VAL 78
S	ASN 3	ALA 79
Y	MET 1	GLU 155
a	GLU 4	GLU 269

There are198 helices in PDB entry 6OQW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	W	3	19	Right-handed alpha
Helix 2	AA2	W	23	38	Right-handed alpha
Helix 3	AA3	W	42	49	Right-handed alpha
Helix 4	AA4	W	52	62	Right-handed alpha
Helix 5	AA5	W	71	82	Right-handed alpha
Helix 6	AA6	W	84	86	Right-handed 310
Helix 7	AA7	W	87	103	Right-handed alpha
Helix 8	AA8	W	119	132	Right-handed alpha
Helix 9	AA9	W	144	147	Right-handed 310
Helix 10	AB1	W	162	174	Right-handed alpha
Helix 11	AB2	C	8	18	Right-handed alpha
Helix 12	AB3	C	20	24	Right-handed 310
Helix 13	AB4	C	100	104	Right-handed 310
Helix 14	AB5	C	152	157	Right-handed alpha
Helix 15	AB6	C	174	186	Right-handed alpha
Helix 16	AB7	C	187	189	Right-handed 310
Helix 17	AB8	C	201	215	Right-handed alpha
Helix 18	AB9	C	217	219	Right-handed 310
Helix 19	AC1	C	231	252	Right-handed alpha
Helix 20	AC2	C	262	277	Right-handed alpha
Helix 21	AC3	C	282	286	Right-handed 310
Helix 22	AC4	C	287	289	Right-handed 310
Helix 23	AC5	C	290	299	Right-handed alpha
Helix 24	AC6	C	305	313	Right-handed alpha
Helix 25	AC7	C	333	336	Right-handed 310
Helix 26	AC8	C	339	347	Right-handed alpha
Helix 27	AC9	C	356	362	Right-handed alpha
Helix 28	AD1	C	377	382	Right-handed 310
Helix 29	AD2	C	383	390	Right-handed alpha
Helix 30	AD3	C	392	407	Right-handed alpha
Helix 31	AD4	C	416	432	Right-handed alpha
Helix 32	AD5	C	440	453	Right-handed alpha
Helix 33	AD6	C	463	478	Right-handed alpha
Helix 34	AD7	C	481	485	Right-handed 310
Helix 35	AD8	C	493	509	Right-handed alpha
Helix 36	AD9	B	5	18	Right-handed alpha
Helix 37	AE1	B	100	104	Right-handed 310
Helix 38	AE2	B	150	157	Right-handed alpha
Helix 39	AE3	B	174	185	Right-handed alpha
Helix 40	AE4	B	201	215	Right-handed alpha
Helix 41	AE5	B	217	219	Right-handed 310
Helix 42	AE6	B	231	237	Right-handed alpha
Helix 43	AE7	B	237	251	Right-handed alpha
Helix 44	AE8	B	262	276	Right-handed alpha
Helix 45	AE9	B	287	289	Right-handed 310
Helix 46	AF1	B	290	299	Right-handed alpha
Helix 47	AF2	B	305	313	Right-handed alpha
Helix 48	AF3	B	339	349	Right-handed alpha
Helix 49	AF4	B	356	362	Right-handed alpha
Helix 50	AF5	B	377	382	Right-handed 310
Helix 51	AF6	B	383	391	Right-handed alpha
Helix 52	AF7	B	392	408	Right-handed alpha
Helix 53	AF8	B	416	431	Right-handed alpha
Helix 54	AF9	B	440	453	Right-handed alpha
Helix 55	AG1	B	464	478	Right-handed alpha
Helix 56	AG2	B	479	490	Right-handed alpha
Helix 57	AG3	B	493	511	Right-handed alpha
Helix 58	AG4	A	5	19	Right-handed alpha
Helix 59	AG5	A	135	139	Right-handed 310
Helix 60	AG6	A	150	157	Right-handed alpha
Helix 61	AG7	A	174	181	Right-handed alpha
Helix 62	AG8	A	201	215	Right-handed alpha
Helix 63	AG9	A	217	219	Right-handed 310
Helix 64	AH1	A	231	251	Right-handed alpha
Helix 65	AH2	A	262	277	Right-handed alpha
Helix 66	AH3	A	282	286	Right-handed 310
Helix 67	AH4	A	287	289	Right-handed 310
Helix 68	AH5	A	290	299	Right-handed alpha
Helix 69	AH6	A	305	313	Right-handed alpha
Helix 70	AH7	A	339	349	Right-handed alpha
Helix 71	AH8	A	356	362	Right-handed alpha
Helix 72	AH9	A	377	382	Right-handed 310
Helix 73	AI1	A	383	404	Right-handed alpha
Helix 74	AI2	A	405	410	Right-handed 310
Helix 75	AI3	A	414	431	Right-handed alpha
Helix 76	AI4	A	440	453	Right-handed alpha
Helix 77	AI5	A	454	458	Right-handed 310
Helix 78	AI6	A	460	462	Right-handed 310
Helix 79	AI7	A	463	479	Right-handed alpha
Helix 80	AI8	A	479	490	Right-handed alpha
Helix 81	AI9	A	493	511	Right-handed alpha
Helix 82	AJ1	X	5	25	Right-handed alpha
Helix 83	AJ2	X	25	136	Right-handed alpha
Helix 84	AJ3	X	144	147	Right-handed 310
Helix 85	AJ4	X	148	153	Right-handed alpha
Helix 86	AJ5	H	86	103	Right-handed alpha
Helix 87	AJ6	H	111	125	Right-handed alpha
Helix 88	AJ7	G	2	40	Right-handed alpha
Helix 89	AJ8	G	41	58	Right-handed alpha
Helix 90	AJ9	G	64	68	Right-handed 310
Helix 91	AK1	G	89	108	Right-handed alpha
Helix 92	AK2	G	118	129	Right-handed alpha
Helix 93	AK3	G	144	161	Right-handed alpha
Helix 94	AK4	G	197	203	Right-handed 310
Helix 95	AK5	G	210	283	Right-handed alpha
Helix 96	AK6	F	80	84	Right-handed 310
Helix 97	AK7	F	115	119	Right-handed 310
Helix 98	AK8	F	130	137	Right-handed alpha
Helix 99	AK9	F	154	167	Right-handed alpha
Helix 100	AL1	F	182	196	Right-handed alpha
Helix 101	AL2	F	198	200	Right-handed 310
Helix 102	AL3	F	212	233	Right-handed alpha
Helix 103	AL4	F	244	256	Right-handed alpha
Helix 104	AL5	F	270	280	Right-handed alpha
Helix 105	AL6	F	299	302	Right-handed 310
Helix 106	AL7	F	305	312	Right-handed alpha
Helix 107	AL8	F	313	315	Right-handed 310
Helix 108	AL9	F	322	328	Right-handed alpha
Helix 109	AM1	F	345	350	Right-handed alpha
Helix 110	AM2	F	350	378	Right-handed alpha
Helix 111	AM3	F	379	382	Right-handed 310
Helix 112	AM4	F	383	400	Right-handed alpha
Helix 113	AM5	F	419	432	Right-handed alpha
Helix 114	AM6	F	439	444	Right-handed 310
Helix 115	AM7	F	448	458	Right-handed alpha
Helix 116	AM8	E	80	84	Right-handed 310
Helix 117	AM9	E	115	119	Right-handed 310
Helix 118	AN1	E	130	137	Right-handed alpha
Helix 119	AN2	E	154	169	Right-handed alpha
Helix 120	AN3	E	182	195	Right-handed alpha
Helix 121	AN4	E	198	200	Right-handed 310
Helix 122	AN5	E	212	233	Right-handed alpha
Helix 123	AN6	E	243	259	Right-handed alpha
Helix 124	AN7	E	270	280	Right-handed alpha
Helix 125	AN8	E	298	302	Right-handed 310
Helix 126	AN9	E	305	312	Right-handed alpha
Helix 127	AO1	E	322	328	Right-handed alpha
Helix 128	AO2	E	345	350	Right-handed alpha
Helix 129	AO3	E	350	378	Right-handed alpha
Helix 130	AO4	E	379	382	Right-handed 310
Helix 131	AO5	E	385	400	Right-handed alpha
Helix 132	AO6	E	407	412	Right-handed alpha
Helix 133	AO7	E	419	432	Right-handed alpha
Helix 134	AO8	E	439	443	Right-handed 310
Helix 135	AO9	E	448	459	Right-handed alpha
Helix 136	AP1	D	80	84	Right-handed 310
Helix 137	AP2	D	130	137	Right-handed alpha
Helix 138	AP3	D	154	169	Right-handed alpha
Helix 139	AP4	D	182	196	Right-handed alpha
Helix 140	AP5	D	197	200	Right-handed 310
Helix 141	AP6	D	212	218	Right-handed alpha
Helix 142	AP7	D	218	233	Right-handed alpha
Helix 143	AP8	D	243	258	Right-handed alpha
Helix 144	AP9	D	270	280	Right-handed alpha
Helix 145	AQ1	D	305	312	Right-handed alpha
Helix 146	AQ2	D	322	328	Right-handed alpha
Helix 147	AQ3	D	345	378	Right-handed alpha
Helix 148	AQ4	D	379	382	Right-handed 310
Helix 149	AQ5	D	385	400	Right-handed alpha
Helix 150	AQ6	D	407	412	Right-handed alpha
Helix 151	AQ7	D	419	432	Right-handed alpha
Helix 152	AQ8	D	439	443	Right-handed 310
Helix 153	AQ9	D	448	459	Right-handed alpha
Helix 154	AR1	I	4	8	Right-handed alpha
Helix 155	AR2	I	8	42	Right-handed alpha
Helix 156	AR3	I	45	77	Right-handed alpha
Helix 157	AR4	J	4	42	Right-handed alpha
Helix 158	AR5	J	45	78	Right-handed alpha
Helix 159	AR6	L	4	40	Right-handed alpha
Helix 160	AR7	L	42	44	Right-handed 310
Helix 161	AR8	L	45	61	Right-handed alpha
Helix 162	AR9	L	61	77	Right-handed alpha
Helix 163	AS1	M	4	40	Right-handed alpha
Helix 164	AS2	M	42	44	Right-handed 310
Helix 165	AS3	M	45	61	Right-handed alpha
Helix 166	AS4	M	61	76	Right-handed alpha
Helix 167	AS5	N	4	42	Right-handed alpha
Helix 168	AS6	N	45	61	Right-handed alpha
Helix 169	AS7	N	61	77	Right-handed alpha
Helix 170	AS8	O	6	42	Right-handed alpha
Helix 171	AS9	O	45	61	Right-handed alpha
Helix 172	AT1	O	61	77	Right-handed alpha
Helix 173	AT2	P	5	42	Right-handed alpha
Helix 174	AT3	P	45	77	Right-handed alpha
Helix 175	AT4	Q	4	42	Right-handed alpha
Helix 176	AT5	Q	45	61	Right-handed alpha
Helix 177	AT6	Q	61	77	Right-handed alpha
Helix 178	AT7	R	4	40	Right-handed alpha
Helix 179	AT8	R	42	44	Right-handed 310
Helix 180	AT9	R	45	61	Right-handed alpha
Helix 181	AU1	R	61	77	Right-handed alpha
Helix 182	AU2	S	7	42	Right-handed alpha
Helix 183	AU3	S	45	61	Right-handed alpha
Helix 184	AU4	S	61	77	Right-handed alpha
Helix 185	AU5	Y	2	25	Right-handed alpha
Helix 186	AU6	Y	25	139	Right-handed alpha
Helix 187	AU7	Y	141	153	Right-handed alpha
Helix 188	AU8	a	7	16	Right-handed alpha
Helix 189	AU9	a	42	65	Right-handed alpha
Helix 190	AV1	a	73	94	Right-handed alpha
Helix 191	AV2	a	100	118	Right-handed alpha
Helix 192	AV3	a	119	121	Right-handed 310
Helix 193	AV4	a	124	133	Right-handed alpha
Helix 194	AV5	a	142	145	Right-handed 310
Helix 195	AV6	a	146	181	Right-handed alpha
Helix 196	AV7	a	185	187	Right-handed 310
Helix 197	AV8	a	188	228	Right-handed alpha
Helix 198	AV9	a	230	269	Right-handed alpha

There are 28 sheets in PDB entry 6OQW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	105	106	first strand
Strand 2	W	135	136	parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	139	142	first strand
Strand 2	W	109	112	parallel
Strand 3	W	150	154	anti-parallel
Strand 4	W	157	160	anti-parallel
Strand 5	B	26	35	anti-parallel
Strand 6	B	38	43	anti-parallel
Strand 7	B	71	76	anti-parallel
Strand 8	B	59	66	anti-parallel

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There are 11 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	26	35	first strand
Strand 2	B	87	94	anti-parallel
Strand 3	B	51	55	anti-parallel
Strand 4	B	59	66	anti-parallel
Strand 5	E	3	9	anti-parallel
Strand 6	E	12	16	anti-parallel
Strand 7	E	50	55	anti-parallel
Strand 8	E	36	45	anti-parallel
Strand 9	E	28	33	anti-parallel
Strand 10	E	67	70	anti-parallel
Strand 11	E	3	9	anti-parallel

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There are 14 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	66	first strand
Strand 2	C	51	55	anti-parallel
Strand 3	C	87	94	anti-parallel
Strand 4	C	28	35	anti-parallel
Strand 5	C	38	43	anti-parallel
Strand 6	C	70	75	anti-parallel
Strand 7	C	59	66	anti-parallel
Strand 8	F	3	9	anti-parallel
Strand 9	F	67	70	anti-parallel
Strand 10	F	28	33	anti-parallel
Strand 11	F	36	45	anti-parallel
Strand 12	F	50	55	anti-parallel
Strand 13	F	12	16	anti-parallel
Strand 14	F	3	9	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	96	99	first strand
Strand 2	C	125	128	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	107	108	first strand
Strand 2	C	221	226	parallel
Strand 3	C	192	198	parallel
Strand 4	C	255	260	parallel
Strand 5	C	323	326	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	145	146	first strand
Strand 2	C	159	160	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	329	331	first strand
Strand 2	C	165	169	parallel
Strand 3	C	351	355	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	96	98	first strand
Strand 2	B	126	128	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	107	109	first strand
Strand 2	B	221	227	parallel
Strand 3	B	191	200	parallel
Strand 4	B	255	261	parallel
Strand 5	B	323	326	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	145	146	first strand
Strand 2	B	159	160	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	329	332	first strand
Strand 2	B	166	170	parallel
Strand 3	B	351	355	parallel
Strand 4	B	374	375	anti-parallel

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There are 14 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	60	66	first strand
Strand 2	A	52	54	anti-parallel
Strand 3	A	87	90	anti-parallel
Strand 4	A	28	35	anti-parallel
Strand 5	A	38	43	anti-parallel
Strand 6	A	71	75	anti-parallel
Strand 7	A	60	66	anti-parallel
Strand 8	D	3	9	anti-parallel
Strand 9	D	67	74	anti-parallel
Strand 10	D	27	33	anti-parallel
Strand 11	D	36	44	anti-parallel
Strand 12	D	50	55	anti-parallel
Strand 13	D	12	16	anti-parallel
Strand 14	D	3	9	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	96	98	first strand
Strand 2	A	126	128	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	107	109	first strand
Strand 2	A	221	226	parallel
Strand 3	A	192	198	parallel
Strand 4	A	255	261	parallel
Strand 5	A	322	331	parallel
Strand 6	A	303	304	anti-parallel

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There are 8 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	107	109	first strand
Strand 2	A	221	226	parallel
Strand 3	A	192	198	parallel
Strand 4	A	255	261	parallel
Strand 5	A	322	331	parallel
Strand 6	A	165	169	parallel
Strand 7	A	351	355	parallel
Strand 8	A	374	375	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	14	16	first strand
Strand 2	H	4	9	anti-parallel
Strand 3	H	19	27	anti-parallel
Strand 4	H	75	80	first strand
Strand 5	H	67	72	anti-parallel
Strand 6	H	41	45	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	30	34	first strand
Strand 2	H	19	27	anti-parallel
Strand 3	H	4	9	anti-parallel
Strand 4	H	48	54	first strand
Strand 5	H	58	64	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	132	136	first strand
Strand 2	G	111	117	parallel
Strand 3	G	74	80	parallel
Strand 4	G	165	176	parallel
Strand 5	G	179	188	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	76	79	first strand
Strand 2	F	105	108	anti-parallel

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There are 8 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	87	88	first strand
Strand 2	F	202	206	parallel
Strand 3	F	174	178	parallel
Strand 4	F	236	241	parallel
Strand 5	F	289	297	parallel
Strand 6	F	144	149	parallel
Strand 7	F	317	320	parallel
Strand 8	F	340	341	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	125	126	first strand
Strand 2	F	139	140	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	76	78	first strand
Strand 2	E	106	108	anti-parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	87	88	first strand
Strand 2	E	202	207	parallel
Strand 3	E	173	179	parallel
Strand 4	E	236	241	parallel
Strand 5	E	288	295	parallel
Strand 6	E	284	285	anti-parallel

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There are 8 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	87	88	first strand
Strand 2	E	202	207	parallel
Strand 3	E	173	179	parallel
Strand 4	E	236	241	parallel
Strand 5	E	288	295	parallel
Strand 6	E	144	147	parallel
Strand 7	E	317	319	parallel
Strand 8	E	340	341	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	125	126	first strand
Strand 2	E	139	140	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	76	78	first strand
Strand 2	D	106	108	anti-parallel

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There are 8 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	87	88	first strand
Strand 2	D	202	208	parallel
Strand 3	D	174	181	parallel
Strand 4	D	236	241	parallel
Strand 5	D	289	297	parallel
Strand 6	D	144	149	parallel
Strand 7	D	317	320	parallel
Strand 8	D	340	341	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6OQW

Analysis of interatomic Contacts of Structural Units in PDB entry:
6OQW